Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  141 bits (356), Expect = 2e-38
 Identities = 75/255 (29%), Positives = 137/255 (53%), Gaps = 8/255 (3%)

Query: 103 WPLIRFHYDTINFDIT------GSVPSAPDSVNWLGTDDKGRDVLARIIYGFRISVLFGF 156
           W +++  YD +  ++       GS+        WLGTD +GRD+++ IIYG RIS+  G 
Sbjct: 52  WIVVQNPYDLMQLNVMDARMPPGSLNGDSGYTYWLGTDGQGRDLVSAIIYGLRISLWVGI 111

Query: 157 ILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEVWSGMPTLFLLIILSSFVEPNFWWLLG 216
              +I++++G L+G    Y GGWLD    R +++    P + + +++ +++      ++ 
Sbjct: 112 GSALIAAVLGTLLGLVSAYVGGWLDALLMRLVDLLLSFPVILMALMILAWLGKGVGNVML 171

Query: 217 IMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAMGVSDMRIILRHMLPNAMVASLTMMPFI 276
            ++L  W       R + L     +YV AA+  GV  +RI++ H+LPN +   + +    
Sbjct: 172 TLILLEWAYYARTARGQALTESRREYVDAARGQGVGPLRIVIGHILPNCLPPLIVIGALQ 231

Query: 277 LSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGKANLQAPWLGISAFVVLSVMLTLLV--F 334
           ++ ++T   +L FLG G+P   PSLG L+A G   + +    IS F  L++++T++    
Sbjct: 232 IARAITLEATLSFLGLGVPVTEPSLGLLIANGFQYMLSNEYWISLFPGLALLITIVAINL 291

Query: 335 IGEAVRDAFDPHLQR 349
           +G+ +RD  +P LQR
Sbjct: 292 VGDRLRDVLNPRLQR 306