Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  437 bits (1123), Expect = e-127
 Identities = 209/334 (62%), Positives = 263/334 (78%), Gaps = 1/334 (0%)

Query: 13  NPLTEARWARFKANRRGFWSLWIFLLLFVVSLFAELIANDKPLLIQYDGAWYMPIVQRYS 72
           +P T  R+  FKANRRG+WSLWIF+ L +V L  ELIANDKPLLI+YDG  Y P++  Y 
Sbjct: 5   SPQTRRRFDLFKANRRGWWSLWIFIGLLLVCLCGELIANDKPLLIRYDGQLYYPVLHTYM 64

Query: 73  ETQFGGEFDTEADYTDPYVVSLIEEK-GQIIWPLIRFHYDTINFDITGSVPSAPDSVNWL 131
           ET FGGE   E DY   YV  LI  K G +++  I F YDTIN+D+    PS PD +NWL
Sbjct: 65  ETDFGGELPFEPDYASDYVRKLIAAKNGWMLFAPIPFSYDTINYDLDAPSPSPPDHINWL 124

Query: 132 GTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEVW 191
           GTD++ RDVLAR+++G RIS+LF  +LT IS++IGV  GA QGYYGG  DL GQR  E+W
Sbjct: 125 GTDEQARDVLARVLFGARISILFALLLTAISTVIGVCAGAIQGYYGGMTDLIGQRIQEIW 184

Query: 192 SGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAMGV 251
           SG+P L+LLIILS FV P+FWWLLGIM LFSW+SLV VVRAEFLR RN +YV+AA+A+G+
Sbjct: 185 SGLPVLYLLIILSGFVSPSFWWLLGIMALFSWLSLVDVVRAEFLRGRNLEYVKAARALGL 244

Query: 252 SDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGKAN 311
           +D  ++ RH+LPNAM ++LT +PFI++G++ TLT+LDFLGFG+PAGS SLGEL+ + K N
Sbjct: 245 TDAALMWRHILPNAMTSTLTYLPFIITGAIATLTALDFLGFGMPAGSASLGELIGEAKRN 304

Query: 312 LQAPWLGISAFVVLSVMLTLLVFIGEAVRDAFDP 345
           LQAPWLG++AFVVL+++L+LLVFIGEA RDAFDP
Sbjct: 305 LQAPWLGLTAFVVLALILSLLVFIGEACRDAFDP 338