Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., peptide transport system permease ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  142 bits (357), Expect = 1e-38
 Identities = 74/228 (32%), Positives = 120/228 (52%), Gaps = 1/228 (0%)

Query: 122 PSAPDSVNWLGTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLD 181
           P  P+S  WLGTD  GRD+L+R+IYG R S++ G +   I+ +IG L+G   GY+ GW+D
Sbjct: 68  PLPPNSQFWLGTDLVGRDLLSRLIYGARTSLVIGVVANGIAVVIGSLVGIAAGYFRGWVD 127

Query: 182 LFGQRFIEVWSGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFD 241
               RF ++    P L L I+L++   P+ W +  ++ + +W+ +  VV  E       D
Sbjct: 128 TVLMRFTDLMMAFPALLLAIVLAAIFTPSLWIVAMVIAMVNWVQIARVVYTETRSIAERD 187

Query: 242 YVRAAQAMGVSDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSL 301
           +V A +AMG    RI+ RH+LP+ +   +      ++ +V    +L FLG G+    PS 
Sbjct: 188 FVTAERAMGAGAGRILFRHILPHLLSTIIVWATLGIATTVLLEATLSFLGIGVQPPIPSW 247

Query: 302 GELLAQGKANL-QAPWLGISAFVVLSVMLTLLVFIGEAVRDAFDPHLQ 348
           G ++ + +     APWL       +  +      +G+A+RD  DP  Q
Sbjct: 248 GNIIFENQTYFTSAPWLVFIPGAAILALALAFNLVGDALRDVLDPTQQ 295