Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., mureinpeptideoligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  136 bits (342), Expect = 1e-36
 Identities = 91/228 (39%), Positives = 124/228 (54%), Gaps = 16/228 (7%)

Query: 131 LGTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEV 190
           LGTD  GRDVL+RIIYG RIS+  G +   +S ++G++IG   GY+GG  DL  QR IEV
Sbjct: 139 LGTDRLGRDVLSRIIYGARISLTIGLLGITVSFVLGIVIGGLAGYHGGIFDLVVQRLIEV 198

Query: 191 WSGMPTLFLLIILSSFVEPNFW----WLLGIMV---LFSWMSLVGVVRAEFLRCRNFDYV 243
              +P++ L + L++ + P  W      LGI V   L  W  L   VR++ L  R  DYV
Sbjct: 199 LQSIPSIPLWLSLAA-IMPATWSPLLIYLGITVILGLLDWTGLARAVRSKLLALREEDYV 257

Query: 244 RAAQAMGVSDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGE 303
            AAQ MG    RII RH++P  M   +      + G +   T+L FLG GL     S G 
Sbjct: 258 LAAQLMGARSGRIIGRHLVPGFMSHLIATATISIPGMILGETALSFLGLGLRPPITSWGI 317

Query: 304 LLAQGKANLQA---PWLGISAFVVLSVMLTLLV--FIGEAVRDAFDPH 346
           LL + K+       PWL    F  + V+L +L   F+G+ +RDA DP+
Sbjct: 318 LLTEAKSVSVIAFYPWL---LFPTIPVILVILAFNFLGDGLRDAADPY 362