Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., oligopeptide uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  145 bits (366), Expect = 2e-39
 Identities = 76/215 (35%), Positives = 127/215 (59%), Gaps = 1/215 (0%)

Query: 132 GTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEVW 191
           GTD  GRD+L R++ G +IS+  G + +++S  IGV+ GAT GY GG +D    R +E+ 
Sbjct: 159 GTDSNGRDLLVRVMLGGQISIAVGLLASLVSLGIGVVYGATSGYIGGRVDNVMMRLVEIL 218

Query: 192 SGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAMGV 251
             +P +FL+++L  F   +F  +  ++    W+ +  +VR + L  +  ++V AAQA+G+
Sbjct: 219 YSLPFVFLVVVLVVFFGRSFILIFLVIGAVEWLDMARIVRGQTLALKRREFVGAAQALGL 278

Query: 252 SDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGKAN 311
           +D +II RH++PN +   +  +  ++   +   + L FLG G+ A   S G L+++G  N
Sbjct: 279 TDWQIIRRHIIPNTIGPVIVFVTVVVPKVILLESFLSFLGLGVQAPLTSWGALISEGANN 338

Query: 312 LQ-APWLGISAFVVLSVMLTLLVFIGEAVRDAFDP 345
           +Q APWL I   +   V L  L F+G+ +RDA DP
Sbjct: 339 IQSAPWLLIFPAIFFVVTLFSLNFVGDGLRDALDP 373