Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., oligopeptidemurein peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  130 bits (326), Expect = 6e-35
 Identities = 66/217 (30%), Positives = 120/217 (55%), Gaps = 2/217 (0%)

Query: 131 LGTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEV 190
           LGTD  GRD+++ I+YG RIS++   + + +++LIG+  G +  Y+G W+D+   R +++
Sbjct: 70  LGTDGLGRDIVSTILYGLRISLVVSIVSSALAALIGLTAGVSAAYFGKWVDIAIMRLVDL 129

Query: 191 WSGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAMG 250
              +PT+ + +I    + P    ++  +++  W +   + R   L   N  Y+ AA+ M 
Sbjct: 130 QLSLPTILIALIAIVTLGPGIDRIILALIIAQWATYARIARGVALSEANKPYMDAARLMR 189

Query: 251 VSDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGKA 310
           +   RII RH+LPN++  ++T++P  +  +V    +L FLG G+P   PSLG  +A G  
Sbjct: 190 LPTSRIIFRHLLPNSIAPAVTLIPIEVGHAVALEATLSFLGLGVPIDKPSLGSAVANGFQ 249

Query: 311 NLQAP--WLGISAFVVLSVMLTLLVFIGEAVRDAFDP 345
            L     W+ +   + L  ++  +  +GE VR + DP
Sbjct: 250 YLLTGQYWISLFPGLALFGLIASINLVGEDVRRSLDP 286