Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  453 bits (1166), Expect = e-132
 Identities = 218/332 (65%), Positives = 263/332 (79%)

Query: 14  PLTEARWARFKANRRGFWSLWIFLLLFVVSLFAELIANDKPLLIQYDGAWYMPIVQRYSE 73
           PLT  R A F+ NRRGF SLWIFL LF++SL AEL+ANDKPL++ Y G  Y P+++ Y E
Sbjct: 9   PLTRRRLAAFRRNRRGFHSLWIFLTLFIISLGAELVANDKPLVLSYKGDLYFPVLKDYPE 68

Query: 74  TQFGGEFDTEADYTDPYVVSLIEEKGQIIWPLIRFHYDTINFDITGSVPSAPDSVNWLGT 133
           T FGG F T ADY DPYV   I   G  +WP +RF YDT+N  +   VPSAP   N LGT
Sbjct: 69  TTFGGFFPTTADYRDPYVAEAIANDGWTVWPPVRFAYDTVNRTLDRPVPSAPTWDNPLGT 128

Query: 134 DDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEVWSG 193
           DD+GRDV AR++YGFR+SVLFG  LT +SSLIGV  GA QGY+GGW+DL  QR +E+W G
Sbjct: 129 DDQGRDVFARLLYGFRLSVLFGLALTALSSLIGVAAGAVQGYFGGWIDLLAQRVLEIWGG 188

Query: 194 MPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAMGVSD 253
           +P LF+LII++S ++P FW LL I++LFSW +LVGVVRAEFLR RNFDYVRAA+A+G+SD
Sbjct: 189 LPQLFVLIIVASVIQPGFWTLLLILLLFSWTALVGVVRAEFLRGRNFDYVRAAKALGMSD 248

Query: 254 MRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGKANLQ 313
            +I+++H+LPNAMVA+LT  PFILSGSVT LT+LDFLG G+P GSPSLGELL  GK NLQ
Sbjct: 249 TKIMIKHVLPNAMVATLTFAPFILSGSVTALTALDFLGLGMPPGSPSLGELLRVGKENLQ 308

Query: 314 APWLGISAFVVLSVMLTLLVFIGEAVRDAFDP 345
           APWLG + F+VL+ MLTLLVFIGEAVRDAFDP
Sbjct: 309 APWLGFTGFIVLAAMLTLLVFIGEAVRDAFDP 340