Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 276 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  135 bits (340), Expect = 1e-36
 Identities = 74/220 (33%), Positives = 128/220 (58%), Gaps = 4/220 (1%)

Query: 130 WLGTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIE 189
           WLGTD+ GRD+ A+I +G R+S++ G + T I+  +GVL+GA  GYYGG +D    R  +
Sbjct: 56  WLGTDNSGRDIAAQIFHGARLSLVIGVVATSIAIALGVLVGALAGYYGGLVDDALMRITD 115

Query: 190 VWSGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAM 249
            +  +P   LL++L +        ++  + + SW +   + RAEFL  R  ++V+AA+  
Sbjct: 116 AFQTLPNFLLLLLLIAVFGSRIETVVIAIGIVSWPAPARLTRAEFLSLRGREFVQAARLA 175

Query: 250 GVSDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGK 309
           G+ D+R+I R +LPNA+   +     +++ ++   ++L FL    P  S S G L+ QG+
Sbjct: 176 GLRDLRLIFREILPNALPPIIVYASVVMATAILLESALAFLNLSDPNVS-SWGNLIGQGR 234

Query: 310 ANLQAPWLGISAFVVLSVMLTLLV--FIGEAVRDAFDPHL 347
             L++ W  +SA    +++LT+L    +G+ + DA +P L
Sbjct: 235 GVLRSEWY-VSAIPGFAILLTVLAVSLVGQGLNDALNPRL 273