Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., ABC transporter permease from Pseudomonas fluorescens SBW25-INTG

 Score =  442 bits (1138), Expect = e-129
 Identities = 207/334 (61%), Positives = 270/334 (80%), Gaps = 1/334 (0%)

Query: 13  NPLTEARWARFKANRRGFWSLWIFLLLFVVSLFAELIANDKPLLIQYDGAWYMPIVQRYS 72
           +P+   R+ RFK NRRG+WSLW+F+ LF+++L  ELIANDKPL++ +    Y P+ +RY+
Sbjct: 6   SPVARRRFERFKKNRRGWWSLWLFIGLFILTLGGELIANDKPLVLSFKNELYFPVFKRYT 65

Query: 73  ETQFGGEFDTEADYTDPYVVSLIEEKGQ-IIWPLIRFHYDTINFDITGSVPSAPDSVNWL 131
           E QFGG+   +ADY   YV  LIE+ G  +++P I F  DT N+++T   PS P +VNWL
Sbjct: 66  EQQFGGQLPFQADYRSDYVQKLIEQDGGWMLFPPIPFSDDTPNYELTRPAPSPPSAVNWL 125

Query: 132 GTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEVW 191
           GTDD+ RDVLAR+I+G R+S+LF   LT IS+ IG+  GA QGYYGGW+DL GQR +EVW
Sbjct: 126 GTDDQSRDVLARVIFGARVSILFALALTAISAAIGIAAGALQGYYGGWVDLIGQRVLEVW 185

Query: 192 SGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAMGV 251
           SG+P L+LLIILS FVEPNFWWLLGIM LFSW++LV VVRAEFLR RN +YV+AA+A+G+
Sbjct: 186 SGLPVLYLLIILSGFVEPNFWWLLGIMALFSWLALVDVVRAEFLRGRNLEYVKAARALGL 245

Query: 252 SDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGKAN 311
            D +II RH+LPNAM A+L+ +PFIL+G+++TL++LDFLGFG+PAGS SLGEL+AQGK N
Sbjct: 246 GDGKIIRRHILPNAMTATLSYLPFILTGAISTLSALDFLGFGMPAGSASLGELIAQGKQN 305

Query: 312 LQAPWLGISAFVVLSVMLTLLVFIGEAVRDAFDP 345
           LQAPWLG++AF  L+++L+LLVFIGEA+RDAFDP
Sbjct: 306 LQAPWLGLTAFFTLALILSLLVFIGEALRDAFDP 339