Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., Probable dipeptide-transport integral membrane protein ABC transporter DppC from Mycobacterium tuberculosis H37Rv

 Score =  137 bits (346), Expect = 2e-37
 Identities = 79/232 (34%), Positives = 124/232 (53%), Gaps = 4/232 (1%)

Query: 124 APDSVNWLGTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLF 183
           AP + +W GTD +G D+ +R +YG R SV  G   T+   ++G  +GA  G+YG W+D  
Sbjct: 36  APSAAHWFGTDLQGHDIYSRTVYGARASVTVGLGATLAVFVVGGALGALAGFYGSWIDAV 95

Query: 184 GQRFIEVWSGMPTLFLLIILSSFV-EPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDY 242
             R  +V+ G+P L   I+L   +     W ++ I+ LF W  +  + R   L  R  DY
Sbjct: 96  VSRVTDVFLGLPLLLAAIVLMQVMHHRTVWTVIAILALFGWPQVARIARGAVLEVRASDY 155

Query: 243 VRAAQAMGVSDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLG 302
           V AA+A+G++  +I+LRH LPNA+   + +    L   + T  +L +LG GLP    S G
Sbjct: 156 VLAAKALGLNRFQILLRHALPNAVGPVIAVATVALGIFIVTEATLSYLGVGLPTSVVSWG 215

Query: 303 E--LLAQGKANLQAPWLGISAFVVLSVMLTLLVFIGEAVRDAFDPHLQRSRA 352
               +AQ +    +P L   A   L++ +   + +G+A+RDA DP  +  RA
Sbjct: 216 GDINVAQTRLRSGSPILFYPA-GALAITVLAFMMMGDALRDALDPASRAWRA 266