Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., oligopeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  167 bits (423), Expect = 3e-46
 Identities = 88/233 (37%), Positives = 145/233 (62%), Gaps = 5/233 (2%)

Query: 120 SVPSAPDSVNWLGTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGW 179
           ++ S P + + LGTD  GRDVL+R++YG R+S+  GF+   I+  IG+ +G   GY+GG 
Sbjct: 70  TILSGPSATHLLGTDALGRDVLSRLLYGARVSLWVGFVSVGIAVAIGLAVGLVAGYFGGI 129

Query: 180 LDLFGQRFIEVWSGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRN 239
           +D    R +++    P+ FL++ + +F+EP+   ++ ++ L SWM +  +VRAE L  R 
Sbjct: 130 IDELAMRLVDIMLCFPSFFLILAVIAFLEPSLGNIMAVIGLTSWMGVARLVRAETLSLRE 189

Query: 240 FDYVRAAQAMGVSDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSP 299
            ++V AA+  G    RIIL H+LPNAM   L      ++G++ T ++L FLG G+    P
Sbjct: 190 REFVAAARLAGAGRTRIILTHILPNAMAPVLVSATLGVAGAILTESALSFLGLGVQPPDP 249

Query: 300 SLGELLAQGKANLQ-APWLGISAFVVLSVMLTLLVF--IGEAVRDAFDPHLQR 349
           S G +L +GK  L+ APW+  S F  L++++T+L +  +GE++RD  DP L++
Sbjct: 250 SWGNMLLEGKDVLEIAPWM--SLFPGLAILVTVLGYNLLGESLRDFLDPRLKK 300