Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  394 bits (1013), Expect = e-114
 Identities = 190/329 (57%), Positives = 241/329 (73%), Gaps = 1/329 (0%)

Query: 17  EARWARFKANRRGFWSLWIFLLLFVVSLFAELIANDKPLLIQYDGAWYMPIVQRYSETQF 76
           + RW  F+ N R +WSL  F+ LF +SL AE+IAND+PLL+   G  + P++  Y+E  F
Sbjct: 5   QRRWNAFRRNGRAWWSLVFFVTLFCLSLCAEIIANDRPLLVMVHGRLHSPVLHDYTERDF 64

Query: 77  GGEFDTEADYTDPYVVSLIEEKGQIIWPLIRFHYDTINFDITGSVPSAPDSVNWLGTDDK 136
           GGEFDT AD+ DP + + I+  G  +WP +RF   TIN+D   +VP+ P   NWLGTDD+
Sbjct: 65  GGEFDTPADFRDPLLTAYIDAHGWALWPPVRFADATINYDAP-AVPAPPGGGNWLGTDDQ 123

Query: 137 GRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEVWSGMPT 196
           GRD+LAR++YGFR+SVLFG  LT+  S+ G+  GA  GY GG LDLFGQR +E+WSG+P 
Sbjct: 124 GRDILARLLYGFRLSVLFGLALTLAGSVTGIAAGAVMGYRGGRLDLFGQRILEIWSGIPV 183

Query: 197 LFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAMGVSDMRI 256
           L+LL+++ S     FW LLG+M+LF WM LV  VR EFLR RN D+VRAA+A+GV   RI
Sbjct: 184 LYLLMLVGSMFRMTFWTLLGVMLLFGWMRLVPAVRTEFLRGRNLDHVRAARALGVPQWRI 243

Query: 257 ILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGKANLQAPW 316
           +LRH+LPNAMVA +T +PF L+GS+  LTSLDFLGFGLP G PSLGEL+AQG+ANL APW
Sbjct: 244 MLRHVLPNAMVAVVTFLPFQLNGSIVALTSLDFLGFGLPPGYPSLGELVAQGRANLHAPW 303

Query: 317 LGISAFVVLSVMLTLLVFIGEAVRDAFDP 345
           +G S F +L   L LLVFIGE VRDA DP
Sbjct: 304 IGCSVFGLLGGTLMLLVFIGEGVRDALDP 332