Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., peptide ABC transporter permease from Cupriavidus basilensis FW507-4G11

 Score =  360 bits (923), Expect = e-104
 Identities = 175/351 (49%), Positives = 246/351 (70%), Gaps = 7/351 (1%)

Query: 4   MTKASKRVPNPLTEA------RWARFKANRRGFWSLWIFLLLFVVSLFAELIANDKPLLI 57
           M  +S+ +PN L  +       W RF+ NR G+WSL +F+ +F++S+ AE +++D+PL++
Sbjct: 1   MKFSSRALPNGLPHSLSPRQRAWQRFRRNRLGYWSLILFVAIFLLSMVAETLSSDRPLVV 60

Query: 58  QYDGAWYMPIVQRYSETQFGGEFDTEADYTDPYVVSLIEEKGQI-IWPLIRFHYDTINFD 116
           +Y G WY PIV+ Y+E+ F G+F T+ADY DP++   I   G   I+P  R+ YD+IN+ 
Sbjct: 61  KYKGEWYFPIVKTYAESTFDGDFPTKADYLDPFIRDRITSNGNFAIFPPNRYSYDSINYF 120

Query: 117 ITGSVPSAPDSVNWLGTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYY 176
                P+ P + NWLGTDD+GRDVLAR++YGFR+SVLF   LT+I  +IG L GA  G++
Sbjct: 121 SKEPNPAPPSAENWLGTDDRGRDVLARLLYGFRVSVLFSLALTLIGVVIGTLTGALMGFF 180

Query: 177 GGWLDLFGQRFIEVWSGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLR 236
           GG  DL  QR IE+WS MP L+LLII +S   P+   L+ ++ LF WM L   VRAEF R
Sbjct: 181 GGRFDLISQRAIEIWSSMPELYLLIIFASIFTPSLALLIILLSLFGWMGLSDYVRAEFYR 240

Query: 237 CRNFDYVRAAQAMGVSDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPA 296
            R+ DYV+AA+A+G+S+++I+ RH+LPN++   +T +PF +S ++  LTSLDFLG G+P 
Sbjct: 241 NRSLDYVKAARALGLSNVQIMWRHILPNSLTPVITFLPFRMSAAILALTSLDFLGLGVPP 300

Query: 297 GSPSLGELLAQGKANLQAPWLGISAFVVLSVMLTLLVFIGEAVRDAFDPHL 347
            +PSLGELLAQGKANL A W+ +S F VL V L LL F+G+A+RDAFD  L
Sbjct: 301 TTPSLGELLAQGKANLDAWWISLSTFAVLVVTLLLLTFMGDALRDAFDTRL 351