Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., peptide ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  358 bits (919), Expect = e-103
 Identities = 170/326 (52%), Positives = 231/326 (70%), Gaps = 1/326 (0%)

Query: 20  WARFKANRRGFWSLWIFLLLFVVSLFAELIANDKPLLIQYDGAWYMPIVQRYSETQFGGE 79
           W RF+  R G+WSL IF+ LF +SL  E+++ND+PLL++YDG +Y PIV+ Y ET FGG+
Sbjct: 33  WLRFRRQRLGYWSLVIFVSLFAISLLGEVLSNDRPLLVRYDGHYYFPIVKDYPETLFGGD 92

Query: 80  FDTEADYTDPYVVSLIEEKGQI-IWPLIRFHYDTINFDITGSVPSAPDSVNWLGTDDKGR 138
           F   A+Y DPY+ S +E  G   I+P   FHYDTI++      P+ P + NWLGTD  GR
Sbjct: 93  FPARANYLDPYIRSRLESNGNFAIYPPNHFHYDTIDYFAAHPYPAPPTASNWLGTDQFGR 152

Query: 139 DVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEVWSGMPTLF 198
           DVLAR++YGFR+SVL    LTV   ++GVL GA QG+YGG  DL GQR IE+WS MP L+
Sbjct: 153 DVLARLLYGFRLSVLMALALTVSGVVVGVLTGAVQGFYGGRTDLIGQRLIEIWSSMPDLY 212

Query: 199 LLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAMGVSDMRIIL 258
           LLII +S  EP  W L  ++ +F W+ L   VRAEFLR R+ DYV+AA+ MG+++ +I+ 
Sbjct: 213 LLIIFASIFEPTLWLLFILLSMFGWLVLSDYVRAEFLRNRSLDYVKAARTMGLTNWQIMW 272

Query: 259 RHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGKANLQAPWLG 318
           RH+LPN++   +T +PF +S ++ +LTSLDFLG G+P  +PSLGELL +GK NL A W+ 
Sbjct: 273 RHVLPNSLTPVITFLPFRMSAAILSLTSLDFLGLGVPPPTPSLGELLQEGKNNLDAWWIS 332

Query: 319 ISAFVVLSVMLTLLVFIGEAVRDAFD 344
           +SAF  L + L LL F+G+A+R+A D
Sbjct: 333 MSAFAALVITLLLLTFMGDALRNALD 358