Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  620 bits (1598), Expect = 0.0
 Identities = 316/528 (59%), Positives = 403/528 (76%), Gaps = 1/528 (0%)

Query: 3   DWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKG 62
           D ++++ +L+V F +  + + V EGVS  I RGETLALVGESGSGKSVTA++ILRLLP  
Sbjct: 4   DNLIEVRDLAVEFIVGERRQRVVEGVSFDIKRGETLALVGESGSGKSVTAHSILRLLPYP 63

Query: 63  SAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIH 122
            AH+ +G+I +   + L   E+ +R IRG RI MIFQEPM SLNPLH I KQ+ E L IH
Sbjct: 64  LAHHPTGTIQYAGQNLLGLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVLGIH 123

Query: 123 RGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADE 182
           +GL    A ++ +E L  VGI  P  ++ A PHELSGG+RQRVMIAMAL NEPELLIADE
Sbjct: 124 KGLSGKVATRRTLELLELVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADE 183

Query: 183 PTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACH 242
           PTTALDV+VQ +IL+LLK LQ  LGM++L I+HDL++VRRIA RV VMQ G +VE  +C 
Sbjct: 184 PTTALDVTVQLKILELLKQLQARLGMSLLLISHDLNLVRRIAHRVCVMQRGCIVEQASCE 243

Query: 243 TLFAAPAHPYTQQLINADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAV 302
            LF AP HPYT++L+ A+P G P    +  P LLQ E L+VWFPIK G F+RT  YIKAV
Sbjct: 244 ELFRAPQHPYTRELLGAEPSGTPASNVV-GPPLLQVEDLKVWFPIKKGLFKRTVDYIKAV 302

Query: 303 TDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLASQGAIRFAGQDLQALKRREMLPYRS 362
             + F+L +GQ+LG+VGESGSGKST G+AIL+L+ SQG IRF G+ L +L ++++ P R 
Sbjct: 303 DGIRFSLPQGQTLGIVGESGSGKSTLGLAILRLIGSQGGIRFEGKQLDSLTQQQVRPLRR 362

Query: 363 KMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQEVGLDVDTRHRYP 422
           +MQVVFQDP+ +L+PRM V+Q++GEGLR+H    + E + AI A ++EVGLD +TR+RYP
Sbjct: 363 EMQVVFQDPFGSLSPRMCVSQIVGEGLRIHKIGTEAEQEQAIIAALKEVGLDPETRNRYP 422

Query: 423 NEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFIS 482
           +EFSGGQRQRIAIARALVLKP  ILLDEPTS+LDRTVQ QV++LL+ LQ KY LTYLFIS
Sbjct: 423 HEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQTKYNLTYLFIS 482

Query: 483 HDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVRLSLL 530
           HDLAV++AL H  +V+K G++VE G+ +S+F  P HPYTQQL+  + L
Sbjct: 483 HDLAVVKALSHQLMVVKHGQVVEQGDARSIFAAPQHPYTQQLLEAAFL 530