Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  582 bits (1500), Expect = e-170
 Identities = 301/528 (57%), Positives = 393/528 (74%), Gaps = 6/528 (1%)

Query: 1   MNDWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLP 60
           M+D +++I +L V F        V  GVSL I RGE LALVGESGSGKSVTA++ILRLLP
Sbjct: 1   MHDNLIEIRDLRVAFN----GHEVVHGVSLDIRRGECLALVGESGSGKSVTAHSILRLLP 56

Query: 61  KGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLA 120
             +     GSIH+  +D +  S++ LR +RG R+ MIFQEPM SLNPLH + KQ+VE L 
Sbjct: 57  AKTVS-TQGSIHYDGLDLVTASDKQLRSLRGNRVAMIFQEPMSSLNPLHTVEKQIVEILV 115

Query: 121 IHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIA 180
            H+GL+  AA  + +E L  VGIR P  ++ AYPH+LSGG+RQR+MIAMAL NEP+LLIA
Sbjct: 116 THKGLKGKAALSRTLELLELVGIRDPLSRLKAYPHQLSGGQRQRIMIAMALANEPDLLIA 175

Query: 181 DEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA 240
           DEPTTALDV+VQ +IL+LLKSLQQ L M++L I+HDL++VRRIA RV VM+ G++VE   
Sbjct: 176 DEPTTALDVTVQVKILELLKSLQQRLNMSLLLISHDLNLVRRIAQRVCVMREGEIVEQAD 235

Query: 241 CHTLFAAPAHPYTQQLINADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIK 300
           C TLF +P HPY++ LINA+P G PVP+   + TLL  + L+VWFP+   +F+R   Y+K
Sbjct: 236 CQTLFDSPQHPYSRLLINAEPDGEPVPST-HSNTLLSVQDLKVWFPLGKAWFKREPQYVK 294

Query: 301 AVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLASQGAIRFAGQDLQALKRREMLPY 360
           AV  +SF L KG++LG+VGESGSGKST G AIL+L+ S+G+IRF  ++L    +  M P 
Sbjct: 295 AVDGVSFELLKGKTLGIVGESGSGKSTLGQAILRLVDSEGSIRFGTKELSLHSQHLMRPL 354

Query: 361 RSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQEVGLDVDTRHR 420
           R ++QVVFQDP+ +L+PRM+V Q+I EGL  H+     E +  +  V+QEVGLD  TRHR
Sbjct: 355 RRQLQVVFQDPFGSLSPRMTVEQIIAEGLVTHNIGTPKEREQTVIRVLQEVGLDPATRHR 414

Query: 421 YPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLF 480
           YP+EFSGGQRQR++IARALVL+P+ ILLDEPTS+LDRTVQ Q++ LL+DLQ ++ LTYLF
Sbjct: 415 YPHEFSGGQRQRVSIARALVLEPDLILLDEPTSALDRTVQKQIVALLRDLQIRHGLTYLF 474

Query: 481 ISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVRLS 528
           ISHDLAV+ AL H  IV+K G++VE G ++ +F  P   YTQ+L+R S
Sbjct: 475 ISHDLAVVHALAHDLIVIKDGKVVEQGPSREIFAAPQQAYTQELLRSS 522