Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  391 bits (1004), Expect = e-113
 Identities = 243/558 (43%), Positives = 326/558 (58%), Gaps = 46/558 (8%)

Query: 1   MNDWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLP 60
           M D +L+I  L + FG A       +G+ L +  GE++ +VGESGSGKSV   AI  LLP
Sbjct: 1   MADPLLEIRQLQICFGEA----IALQGLDLVVQPGESVGIVGESGSGKSVACLAIPGLLP 56

Query: 61  KGSAHYLSGSIHFGDV------DTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQ 114
           K +    SG I F  V      D L   ER LR +RG R+G IFQEP+ SLNP+   G Q
Sbjct: 57  KTAR--CSGQIAFRSVAGQSSRDLLTLPERELRQLRGDRLGFIFQEPLSSLNPVFSAGFQ 114

Query: 115 LVETLAIHRGLRATAAEQKAIEWLGKVG-IRHPEIK---INAYPHELSGGERQRVMIAMA 170
           L+E +  H  L    A+Q+ I  L +V  IR P      +  YPH+LSGG+RQR+MIA+A
Sbjct: 115 LLEAIQQHLPLSQAEAQQRVIALLQEVQLIREPSQAAQILRRYPHQLSGGQRQRLMIAIA 174

Query: 171 LINEPELLIADEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVM 230
           L   P+LL+ADEPTTALD +VQA +L LL+ LQQ+  MAM+F++HDL ++  +ADRV V+
Sbjct: 175 LAANPDLLLADEPTTALDATVQASVLQLLRRLQQQRQMAMIFVSHDLGVIAEVADRVVVL 234

Query: 231 QSGQLVETNACHTLFAAPAHPYTQQLI----NADPRGVPVPTAMD--------------- 271
             GQ+VE      +  +P HPYTQ L+      +PR   +PT  D               
Sbjct: 235 YRGQVVEQGRVADVLNSPQHPYTQGLVACRPQINPRSCYLPTVADFLEGQTEPRSLPPRS 294

Query: 272 --APTLLQAEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGESGSGKSTTG 329
                LLQ E+L       G  +R      +AV ++SFTL  G +LGLVGESG GKS+  
Sbjct: 295 PATQPLLQVEQL-------GITYRGRSTAFQAVQNLSFTLPAGLTLGLVGESGCGKSSLA 347

Query: 330 MAILKLL-ASQGAIRFAGQDLQALKRREMLPYRSKMQVVFQDPYSALNPRMSVAQVIGEG 388
             ++ L+ AS+G I    Q L     R+    R  +Q+VFQDP +AL+PR +V   I E 
Sbjct: 348 RCLVGLVPASEGQIWLDQQPLDLRSSRDRQRLRQTVQMVFQDPAAALDPRWTVGSAILEP 407

Query: 389 LRVHSQLNDDEIDHAICAV-MQEVGLDVDTRHRYPNEFSGGQRQRIAIARALVLKPEFIL 447
           LR+     D   D  +    +Q V L  D   RYP+EFSGGQRQRI IARAL+ +P  ++
Sbjct: 408 LRIKQPRRDRTADQRLLKQWLQRVDLPTDIGDRYPHEFSGGQRQRICIARALIGQPRLLI 467

Query: 448 LDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHG 507
            DE  S+LD +VQAQ+L+LLK LQ +  LTYLFISHDLAV+R +    +VM  G++ E  
Sbjct: 468 CDESVSALDVSVQAQILNLLKQLQAELGLTYLFISHDLAVVRYMSDRILVMNQGQLEEDS 527

Query: 508 ETQSLFENPSHPYTQQLV 525
            T+ LF+ P   YT++L+
Sbjct: 528 PTEQLFQRPQSDYTRRLI 545



 Score =  177 bits (450), Expect = 7e-49
 Identities = 107/258 (41%), Positives = 152/258 (58%), Gaps = 9/258 (3%)

Query: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64
           +L+++ L + +     A    + +S T+  G TL LVGESG GKS  A  ++ L+P    
Sbjct: 300 LLQVEQLGITYRGRSTAFQAVQNLSFTLPAGLTLGLVGESGCGKSSLARCLVGLVPASE- 358

Query: 65  HYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRG 124
               G I          S R  + +R   + M+FQ+P  +L+P   +G  ++E L I + 
Sbjct: 359 ----GQIWLDQQPLDLRSSRDRQRLRQ-TVQMVFQDPAAALDPRWTVGSAILEPLRIKQP 413

Query: 125 LRATAAEQKAI-EWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEP 183
            R   A+Q+ + +WL +V +  P    + YPHE SGG+RQR+ IA ALI +P LLI DE 
Sbjct: 414 RRDRTADQRLLKQWLQRVDL--PTDIGDRYPHEFSGGQRQRICIARALIGQPRLLICDES 471

Query: 184 TTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHT 243
            +ALDVSVQAQIL+LLK LQ ELG+  LFI+HDL++VR ++DR+ VM  GQL E +    
Sbjct: 472 VSALDVSVQAQILNLLKQLQAELGLTYLFISHDLAVVRYMSDRILVMNQGQLEEDSPTEQ 531

Query: 244 LFAAPAHPYTQQLINADP 261
           LF  P   YT++LI A P
Sbjct: 532 LFQRPQSDYTRRLIAAIP 549