Pairwise Alignments
Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 536 a.a., ATPase from Synechococcus elongatus PCC 7942
Score = 401 bits (1031), Expect = e-116
Identities = 229/530 (43%), Positives = 325/530 (61%), Gaps = 15/530 (2%)
Query: 5 VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64
+L ID LSV + G +P + +SL +A GE L LVGESG GKS AILRLLP GS
Sbjct: 3 LLSIDQLSVTY--PGSEQPALQQLSLELAAGERLGLVGESGCGKSTLGRAILRLLPPGS- 59
Query: 65 HYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRG 124
+ G I + R+L+ RGG++G++FQ+PM L+PL IG L+ETL +HR
Sbjct: 60 -HQQGDIRLAGQALGQLQGRSLQRFRGGQVGLVFQDPMTRLDPLQTIGDHLLETLQVHRP 118
Query: 125 -LRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEP 183
L A+Q+A+ WL +V I P + + YPH+ SGG RQRV IA+AL+ +P L++ADEP
Sbjct: 119 HLSRRQAKQQALSWLERVRI--PANRWSQYPHQFSGGMRQRVAIALALLLQPRLVVADEP 176
Query: 184 TTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHT 243
TT+LDV+V A+IL L L E ++L I+HDL +V DR+AV+ GQLVET
Sbjct: 177 TTSLDVTVAAEILQELTRLCSEENTSLLLISHDLPMVAAYCDRIAVLYQGQLVETGPTTA 236
Query: 244 LFAAPAHPYTQQLINADPRGVPV-PTAMDAPT-LLQAEKLRVWFPIKGGY---FRRTQAY 298
+ P HPYTQ L+ + + P+ + A T LLQ E + F + + +R
Sbjct: 237 VLTRPQHPYTQTLLQSARAAIASSPSTLPATTPLLQLENVTQHFRVAQSWLQGWRGGGEI 296
Query: 299 IKAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLA-SQGAIRFAGQDLQALKRREM 357
++AV +S + G++LGL+GESG GKST IL+LL SQG + F GQDL L R +
Sbjct: 297 VRAVDGLSLEVWPGETLGLIGESGCGKSTLLRTILQLLRPSQGKVLFQGQDLTQLPDRRL 356
Query: 358 LPYRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQEVGLDVDT 417
R ++Q++FQDP + LNPR+++ I + L++ + A++++VGL
Sbjct: 357 RSLRRELQLIFQDPAACLNPRLTIGDAIADPLKIQGLARGAAAKQQVLAILEQVGLTPAP 416
Query: 418 R--HRYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQ 475
RYP++ SGGQ+QR+AIARAL+ +P+ +L DEP S LD TVQAQVL L+++L+Q+
Sbjct: 417 TWIDRYPHQLSGGQQQRVAIARALITRPKLVLCDEPVSMLDATVQAQVLALMQELKQQLN 476
Query: 476 LTYLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLV 525
LTYLF++HDL V R C V++ G+IVE G + P HPYT+ L+
Sbjct: 477 LTYLFVTHDLRVAREFCDRVAVLQRGKIVEIGPAAQVLTQPEHPYTRSLL 526
Score = 184 bits (467), Expect = 7e-51
Identities = 104/267 (38%), Positives = 155/267 (58%), Gaps = 16/267 (5%)
Query: 5 VLKIDNLSVGFGIA----------GQARPVTEGVSLTIARGETLALVGESGSGKSVTANA 54
+L+++N++ F +A G+ +G+SL + GETL L+GESG GKS
Sbjct: 270 LLQLENVTQHFRVAQSWLQGWRGGGEIVRAVDGLSLEVWPGETLGLIGESGCGKSTLLRT 329
Query: 55 ILRLLPKGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQ 114
IL+LL G + F D + +R LR +R + +IFQ+P LNP IG
Sbjct: 330 ILQLLRPSQ-----GKVLFQGQDLTQLPDRRLRSLRR-ELQLIFQDPAACLNPRLTIGDA 383
Query: 115 LVETLAIHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINE 174
+ + L I R AA+Q+ + L +VG+ I+ YPH+LSGG++QRV IA ALI
Sbjct: 384 IADPLKIQGLARGAAAKQQVLAILEQVGLTPAPTWIDRYPHQLSGGQQQRVAIARALITR 443
Query: 175 PELLIADEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQ 234
P+L++ DEP + LD +VQAQ+L L++ L+Q+L + LF+THDL + R DRVAV+Q G+
Sbjct: 444 PKLVLCDEPVSMLDATVQAQVLALMQELKQQLNLTYLFVTHDLRVAREFCDRVAVLQRGK 503
Query: 235 LVETNACHTLFAAPAHPYTQQLINADP 261
+VE + P HPYT+ L+ + P
Sbjct: 504 IVEIGPAAQVLTQPEHPYTRSLLASLP 530
Score = 170 bits (431), Expect = 1e-46
Identities = 103/259 (39%), Positives = 152/259 (58%), Gaps = 15/259 (5%)
Query: 274 TLLQAEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAIL 333
TLL ++L V +P + A+ +S LA G+ LGLVGESG GKST G AIL
Sbjct: 2 TLLSIDQLSVTYP---------GSEQPALQQLSLELAAGERLGLVGESGCGKSTLGRAIL 52
Query: 334 KLLA----SQGAIRFAGQDLQALKRREMLPYRS-KMQVVFQDPYSALNPRMSVAQVIGEG 388
+LL QG IR AGQ L L+ R + +R ++ +VFQDP + L+P ++ + E
Sbjct: 53 RLLPPGSHQQGDIRLAGQALGQLQGRSLQRFRGGQVGLVFQDPMTRLDPLQTIGDHLLET 112
Query: 389 LRVHS-QLNDDEIDHAICAVMQEVGLDVDTRHRYPNEFSGGQRQRIAIARALVLKPEFIL 447
L+VH L+ + + ++ V + + +YP++FSGG RQR+AIA AL+L+P ++
Sbjct: 113 LQVHRPHLSRRQAKQQALSWLERVRIPANRWSQYPHQFSGGMRQRVAIALALLLQPRLVV 172
Query: 448 LDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHG 507
DEPT+SLD TV A++L L L + + L ISHDL ++ A C V+ G++VE G
Sbjct: 173 ADEPTTSLDVTVAAEILQELTRLCSEENTSLLLISHDLPMVAAYCDRIAVLYQGQLVETG 232
Query: 508 ETQSLFENPSHPYTQQLVR 526
T ++ P HPYTQ L++
Sbjct: 233 PTTAVLTRPQHPYTQTLLQ 251