Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., peptide transport system ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  457 bits (1177), Expect = e-133
 Identities = 252/550 (45%), Positives = 348/550 (63%), Gaps = 31/550 (5%)

Query: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRL-LPKGS 63
           VL + NL   F   G    V +GVS  I   ET+A+VGESGSGKSVTA +I+RL  P+G+
Sbjct: 27  VLSVSNLMCSFRADGLWSSVVQGVSFDIGARETVAVVGESGSGKSVTALSIMRLNSPRGT 86

Query: 64  AHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHR 123
              + GS+  G  + L  S+  +R IRG  I MIFQEPM SLNP+  IG Q+ E+L +HR
Sbjct: 87  K--IEGSVKLGGKELLSLSDAEMRQIRGNDIAMIFQEPMTSLNPVLTIGFQIAESLILHR 144

Query: 124 GLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEP 183
           GL    AE + I  L KV I   + + + YPH  SGG RQRVMIAMAL  +P+LLIADEP
Sbjct: 145 GLSRAQAENETIRLLEKVRIPAAKSRFHEYPHRFSGGMRQRVMIAMALACKPKLLIADEP 204

Query: 184 TTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHT 243
           TTALDV++QAQIL+L+K LQQE GM++LFITHD+ +V  IADR  VM  GQ VET +   
Sbjct: 205 TTALDVTIQAQILELIKELQQEDGMSVLFITHDMGVVAEIADRTVVMYKGQAVETASTDD 264

Query: 244 LFAAPAHPYTQQLINADPR---------------------------GVPVPTAMDAPTLL 276
           +F  P HPYT+ L++A P+                            VP    +    +L
Sbjct: 265 IFNRPNHPYTRSLLSAVPKLGSMAGRSRPMRFPVVDRSTGEADVPVEVPDTVKVSERPVL 324

Query: 277 QAEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLL 336
           +   L   F +K G F   +  + AV ++SF++  G++L LVGESG GKSTTG ++++L+
Sbjct: 325 EVAGLTKRFEVKSGLFSTVKGCVHAVENVSFSIKAGETLALVGESGCGKSTTGRSVMRLV 384

Query: 337 -ASQGAIRFAGQDLQALKRREMLPYRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQL 395
             S G +   G D+  L + E+   R+ MQ++FQDPY++LNPRM++   I E L ++ + 
Sbjct: 385 EPSGGLVLLDGVDVLKLSQNELRHQRNHMQMIFQDPYASLNPRMNIGTAIAEPLLINGKG 444

Query: 396 NDDEIDHAICAVMQEVGLDVDTRHRYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSL 455
              E+   +  ++Q+VGL  D   R+P+EFSGGQRQRI IARAL L+P+ I+ DE  S+L
Sbjct: 445 GQSEVADKVAELLQKVGLSPDMAKRFPHEFSGGQRQRICIARALALEPKLIVADEAVSAL 504

Query: 456 DRTVQAQVLDLLKDLQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFEN 515
           D +V++QV++L+ DLQ +  L YLFISHD+AV+  + H   VM  GEIVE G  +++F+N
Sbjct: 505 DVSVKSQVVNLMLDLQARMGLAYLFISHDMAVVERVSHRVAVMYLGEIVEAGSREAIFQN 564

Query: 516 PSHPYTQQLV 525
           P HPYT++L+
Sbjct: 565 PQHPYTRRLL 574



 Score =  190 bits (482), Expect = 2e-52
 Identities = 109/241 (45%), Positives = 151/241 (62%), Gaps = 10/241 (4%)

Query: 26  EGVSLTIARGETLALVGESGSGKSVTANAILRLL-PKGSAHYLSGSIHFGDVDTLRCSER 84
           E VS +I  GETLALVGESG GKS T  +++RL+ P G    L G      VD L+ S+ 
Sbjct: 351 ENVSFSIKAGETLALVGESGCGKSTTGRSVMRLVEPSGGLVLLDG------VDVLKLSQN 404

Query: 85  ALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRGLRATAAEQKAIEWLGKVGIR 144
            LR  R   + MIFQ+P  SLNP   IG  + E L I+     +    K  E L KVG+ 
Sbjct: 405 ELRHQRN-HMQMIFQDPYASLNPRMNIGTAIAEPLLINGKGGQSEVADKVAELLQKVGLS 463

Query: 145 HPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPTTALDVSVQAQILDLLKSLQQ 204
               K   +PHE SGG+RQR+ IA AL  EP+L++ADE  +ALDVSV++Q+++L+  LQ 
Sbjct: 464 PDMAK--RFPHEFSGGQRQRICIARALALEPKLIVADEAVSALDVSVKSQVVNLMLDLQA 521

Query: 205 ELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTLFAAPAHPYTQQLINADPRGV 264
            +G+A LFI+HD+++V R++ RVAVM  G++VE  +   +F  P HPYT++L++A P   
Sbjct: 522 RMGLAYLFISHDMAVVERVSHRVAVMYLGEIVEAGSREAIFQNPQHPYTRRLLSAVPIAD 581

Query: 265 P 265
           P
Sbjct: 582 P 582