Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  600 bits (1547), Expect = e-176
 Identities = 302/526 (57%), Positives = 396/526 (75%), Gaps = 1/526 (0%)

Query: 1   MNDWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLP 60
           M D +L + +LSV F   G+     + +S  I RGET+ALVGESGSGKSV+AN+IL+LLP
Sbjct: 1   MTDTLLSVRDLSVAFHQGGETSLAVDRISFDIKRGETVALVGESGSGKSVSANSILKLLP 60

Query: 61  KGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLA 120
             +A + SG I F   D L+ S+  LR +RG  + MIFQEPM SLNPLH I +Q+ E L 
Sbjct: 61  YPAASHPSGEILFNGKDLLKASDDELRHVRGNDVTMIFQEPMTSLNPLHTIEQQIGEILE 120

Query: 121 IHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIA 180
           IH+ L+  AA  + +E L +VGIR  E ++ AYPH+LSGG+RQRVMIAMAL N PELLIA
Sbjct: 121 IHQDLKGAAARARTLELLEQVGIREAEKRLGAYPHQLSGGQRQRVMIAMALANRPELLIA 180

Query: 181 DEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA 240
           DEPTTALDV+VQAQIL+LLKSL+ E GM+MLFITHDL IVR+IADRV VM  G++VET  
Sbjct: 181 DEPTTALDVTVQAQILELLKSLKDEHGMSMLFITHDLGIVRKIADRVCVMTKGKIVETGP 240

Query: 241 CHTLFAAPAHPYTQQLINADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIK 300
              +FA P H YT+ L+ ++PRG P P+    P +++A+ ++VWFPIK G+ RR   ++K
Sbjct: 241 TAEIFANPQHAYTRHLLASEPRGEPPPSDASRPIVIEAKDMKVWFPIKAGFLRRVVDHVK 300

Query: 301 AVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLASQGAIRFAGQDLQALKRREMLPY 360
           AV  +  TL  GQ+LG+VGESGSGK+T G+A+ +L++S+G I F G+D+ A   REM P 
Sbjct: 301 AVDGIDLTLRAGQTLGVVGESGSGKTTLGLALTRLISSKGRIAFVGEDIDAYSFREMRPL 360

Query: 361 RSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQ-LNDDEIDHAICAVMQEVGLDVDTRH 419
           R++MQVVFQDPY +L+PRMS+A +IGEGL++H + L D E D  + A ++EVGLD  TR 
Sbjct: 361 RNRMQVVFQDPYGSLSPRMSIADIIGEGLKIHEKALTDGERDQRVAAALEEVGLDPATRW 420

Query: 420 RYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYL 479
           RYP+EFSGGQRQRIAIARA+VLKP+F++LDEPTS+LD +VQAQV+DLL+DLQ+K+ L YL
Sbjct: 421 RYPHEFSGGQRQRIAIARAMVLKPQFVMLDEPTSALDMSVQAQVVDLLRDLQRKHNLAYL 480

Query: 480 FISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLV 525
           FISHDL V+RAL +  IVM+ G++VE G  + +FE P+  YT+ L+
Sbjct: 481 FISHDLRVVRALANEVIVMRLGKVVEQGPAERIFEAPTEDYTKALM 526



 Score =  164 bits (414), Expect = 1e-44
 Identities = 105/263 (39%), Positives = 157/263 (59%), Gaps = 17/263 (6%)

Query: 5   VLKIDNLSVGFGI-AGQARPVTE------GVSLTIARGETLALVGESGSGKSVTANAILR 57
           V++  ++ V F I AG  R V +      G+ LT+  G+TL +VGESGSGK+    A+ R
Sbjct: 275 VIEAKDMKVWFPIKAGFLRRVVDHVKAVDGIDLTLRAGQTLGVVGESGSGKTTLGLALTR 334

Query: 58  LLPKGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVE 117
           L+         G I F   D    S R +R +R  R+ ++FQ+P  SL+P   I   + E
Sbjct: 335 LISS------KGRIAFVGEDIDAYSFREMRPLRN-RMQVVFQDPYGSLSPRMSIADIIGE 387

Query: 118 TLAIH-RGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPE 176
            L IH + L     +Q+    L +VG+  P  +   YPHE SGG+RQR+ IA A++ +P+
Sbjct: 388 GLKIHEKALTDGERDQRVAAALEEVGL-DPATRWR-YPHEFSGGQRQRIAIARAMVLKPQ 445

Query: 177 LLIADEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLV 236
            ++ DEPT+ALD+SVQAQ++DLL+ LQ++  +A LFI+HDL +VR +A+ V VM+ G++V
Sbjct: 446 FVMLDEPTSALDMSVQAQVVDLLRDLQRKHNLAYLFISHDLRVVRALANEVIVMRLGKVV 505

Query: 237 ETNACHTLFAAPAHPYTQQLINA 259
           E      +F AP   YT+ L+ A
Sbjct: 506 EQGPAERIFEAPTEDYTKALMAA 528