Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  432 bits (1110), Expect = e-125
 Identities = 229/527 (43%), Positives = 338/527 (64%), Gaps = 6/527 (1%)

Query: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64
           +L+ID L+V F   G      + VS  +  GETL ++GESGSGKSV+   ++ L+     
Sbjct: 8   ILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDCPPG 67

Query: 65  HYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRG 124
             +SGS+ F   D  R  +   R + G RI MIFQ+P+  LNP++ +G+Q+ E    H  
Sbjct: 68  DIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEVFESHGE 127

Query: 125 LRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPT 184
               A   K +  L +VGI   + +I+ YPH+ SGG+RQRVMIAMA+  +P++LIADEPT
Sbjct: 128 GEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKPDILIADEPT 187

Query: 185 TALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTL 244
           TALDVSVQAQIL+LL+ LQ+E GMA++ ITHDL +   +ADR+ VM  G++VE+     +
Sbjct: 188 TALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVESGKAEDV 247

Query: 245 FAAPAHPYTQQLINADPRG---VPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIKA 301
           F  P+H YT++L++A P          A     LLQ   L   + +  G F   + + +A
Sbjct: 248 FTNPSHAYTRRLMSAVPHADAPKAPRNAAQGEVLLQVAHLSKHYKLGSGPFSPKREF-RA 306

Query: 302 VTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKL-LASQGAIRFAGQDLQALKRREMLPY 360
           V D+SFTL +G+++G+VGESGSGKS+    +L+L   + GA  FAG+D+  LK + +  +
Sbjct: 307 VDDVSFTLRRGETVGIVGESGSGKSSIARMLLRLNEPTSGAALFAGEDIFELKGKALDGF 366

Query: 361 RSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQ-LNDDEIDHAICAVMQEVGLDVDTRH 419
           R ++Q+VFQDP+ ++NPRM+V  +I E   +H   L  +  +  +  +++ VGL  +   
Sbjct: 367 RRRVQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLELVGLKAEHAA 426

Query: 420 RYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYL 479
           R+P++FSGGQRQRIAIARAL  +PE I+ DE  S+LD ++Q QV++LL DL+Q+  L+Y+
Sbjct: 427 RHPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLADLRQRLGLSYV 486

Query: 480 FISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVR 526
           FI+HDL ++R      +VM+ G IVE GET++LF +P H YTQ L+R
Sbjct: 487 FITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLR 533



 Score =  186 bits (473), Expect = 1e-51
 Identities = 108/250 (43%), Positives = 149/250 (59%), Gaps = 14/250 (5%)

Query: 26  EGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSAHYLSGSIHFGDVDTLRCSERA 85
           + VS T+ RGET+ +VGESGSGKS  A  +LRL         SG+  F   D      +A
Sbjct: 308 DDVSFTLRRGETVGIVGESGSGKSSIARMLLRLNEP-----TSGAALFAGEDIFELKGKA 362

Query: 86  LRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRGLRATAA-EQKAIEWLGKVGIR 144
           L G R  R+ M+FQ+P  S+NP   +   + E  AIHR +       ++ +E L  VG++
Sbjct: 363 LDGFRR-RVQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLELVGLK 421

Query: 145 HPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPTTALDVSVQAQILDLLKSLQQ 204
                   +PH+ SGG+RQR+ IA AL +EPEL++ DE  +ALDVS+Q Q+++LL  L+Q
Sbjct: 422 AEHAA--RHPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLADLRQ 479

Query: 205 ELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTLFAAPAHPYTQQLINADP--- 261
            LG++ +FITHDL IVR+ ADR+ VMQ G++VE      LF +P H YTQ L+ A P   
Sbjct: 480 RLGLSYVFITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLRAVPQPK 539

Query: 262 --RGVPVPTA 269
             R  P P A
Sbjct: 540 WLRSDPAPIA 549