Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., mureinpeptideoligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  397 bits (1021), Expect = e-115
 Identities = 243/561 (43%), Positives = 323/561 (57%), Gaps = 42/561 (7%)

Query: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64
           +L+++ L + F + G       G +  I  G   ALVGESGSGKS  + AI+ +LP  S 
Sbjct: 7   LLRVEGLRITFSVLGGEVEAVRGANFRILPGRVTALVGESGSGKSAISQAIMGILP--SV 64

Query: 65  HYLSGSIHFGD-------VDTLRCSE--RALRGIRGGRIGMIFQEPMVSLNPLHKIGKQL 115
             + G + F D       VD L      R ++ IRG RI  IFQEPM SL+PLH IG Q+
Sbjct: 65  ASVGGRVLFNDPEAEANPVDLLSLDRDGRDIQEIRGARISKIFQEPMTSLSPLHTIGNQI 124

Query: 116 VETLAIHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEP 175
            E L IH         ++  E LG VG   P+   + YP ELSGG RQR MIAMALI  P
Sbjct: 125 SEVLKIHTDADKAGRRERTEELLGYVGFSDPKRAYDMYPFELSGGMRQRAMIAMALICRP 184

Query: 176 ELLIADEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQL 235
            LLIADEPTTALDV+VQAQIL LL+ LQ +L MAML ITHDL +V  +AD V V+  G++
Sbjct: 185 ALLIADEPTTALDVTVQAQILQLLRELQSKLNMAMLLITHDLGVVANMADEVVVIYHGEI 244

Query: 236 VETNACHTLFAAPAHPYTQQLINADP-------------RGVPVPT-----------AMD 271
           VE      +F  P HPY + L+ A P             R VPV             A  
Sbjct: 245 VEAGPVDAIFRNPRHPYLKGLMAAVPHFDMKPGERLKALREVPVKAGAIVGDREVKKAAG 304

Query: 272 APTLLQAEKLRVWFPIK-GGYFRRTQAY-IKAVTDMSFTLAKGQSLGLVGESGSGKSTTG 329
              L+    L   F  +  G+F    AY  +AV ++SF + +G+ LGLVGESG GK+T  
Sbjct: 305 PNVLVSVRNLSKTFSTRSSGWFGSGTAYRHRAVDNVSFDIRRGECLGLVGESGCGKTTVS 364

Query: 330 MAILKLLA-SQGAIRF----AGQDLQALKRREMLPYRSKMQVVFQDPYSALNPRMSVAQV 384
             +++ +   +G I F       D+  L   E+   R+K+Q+VFQDP S+L+PRM+V  +
Sbjct: 365 KILMRAVTPDKGTITFDDGEGALDVLKLDGGELKALRAKIQMVFQDPVSSLSPRMTVKNI 424

Query: 385 IGEGLRVHSQLNDDEIDHAICAVMQEVGLDVDTRHRYPNEFSGGQRQRIAIARALVLKPE 444
           + E L +H +      +  + +++Q VGLD    +RYP+ FSGGQRQRI IARAL L P+
Sbjct: 425 LSEPLEIHGRGTPKSREEHVRSLLQAVGLDQRFINRYPHSFSGGQRQRIGIARALALVPQ 484

Query: 445 FILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIV 504
            ++ DEP S+LD +VQAQ+L+LLKDLQ++  LT LFISH+LAV+  +     VM AG IV
Sbjct: 485 LLICDEPVSALDVSVQAQILNLLKDLQKELGLTMLFISHNLAVVDYMADRIAVMCAGRIV 544

Query: 505 EHGETQSLFENPSHPYTQQLV 525
           E    + L  NP HPYT+ L+
Sbjct: 545 ELAPREVLMRNPVHPYTRSLL 565



 Score =  180 bits (457), Expect = 1e-49
 Identities = 112/250 (44%), Positives = 153/250 (61%), Gaps = 9/250 (3%)

Query: 14  GFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLP--KGSAHYLSGSI 71
           G G A + R V + VS  I RGE L LVGESG GK+  +  ++R +   KG+  +  G  
Sbjct: 327 GSGTAYRHRAV-DNVSFDIRRGECLGLVGESGCGKTTVSKILMRAVTPDKGTITFDDGE- 384

Query: 72  HFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRGLRATAAE 131
             G +D L+     L+ +R  +I M+FQ+P+ SL+P   +   L E L IH      + E
Sbjct: 385 --GALDVLKLDGGELKALRA-KIQMVFQDPVSSLSPRMTVKNILSEPLEIHGRGTPKSRE 441

Query: 132 QKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPTTALDVSV 191
           +     L  VG+   +  IN YPH  SGG+RQR+ IA AL   P+LLI DEP +ALDVSV
Sbjct: 442 EHVRSLLQAVGL--DQRFINRYPHSFSGGQRQRIGIARALALVPQLLICDEPVSALDVSV 499

Query: 192 QAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTLFAAPAHP 251
           QAQIL+LLK LQ+ELG+ MLFI+H+L++V  +ADR+AVM +G++VE      L   P HP
Sbjct: 500 QAQILNLLKDLQKELGLTMLFISHNLAVVDYMADRIAVMCAGRIVELAPREVLMRNPVHP 559

Query: 252 YTQQLINADP 261
           YT+ L+ A P
Sbjct: 560 YTRSLLAAVP 569