Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  416 bits (1069), Expect = e-120
 Identities = 234/532 (43%), Positives = 330/532 (62%), Gaps = 15/532 (2%)

Query: 1   MNDWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLP 60
           M + +L++ NLSV F  A       + +S  + +GETLA++GESGSGKSV+++AI+ L+ 
Sbjct: 1   MAEHLLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLID 60

Query: 61  KGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLA 120
                  SG I     D L       R + G R+ MIFQ+P+  LNP++ +G Q+ E + 
Sbjct: 61  MPPGRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMT 120

Query: 121 IHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIA 180
            H GL  + A ++A+  L +VGI  PE  +  YPHE SGG+RQRVMIAMAL   P+LLIA
Sbjct: 121 TH-GLAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIA 179

Query: 181 DEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA 240
           DEPTTALDV+VQA++L LLK LQ+E GMA+L ITHDL +V  IADRV VM+ G +VE   
Sbjct: 180 DEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGT 239

Query: 241 CHTLFAAPAHPYTQQLINADP-RGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYI 299
              ++  P HPYTQ+LI A P +G        A  LL    +           R+T    
Sbjct: 240 VREIYKNPQHPYTQKLIAAAPGKGAMHEPGARAEPLLSVRDV-----------RKTYGSF 288

Query: 300 KAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKL-LASQGAIRFAGQDLQALKRREML 358
           +A+  +SF L  G+++ +VGESGSGKST   A+L+L     G   + G+DL AL   E+ 
Sbjct: 289 EALKGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTALWKGRDLFALSPAELY 348

Query: 359 PYRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQ-LNDDEIDHAICAVMQEVGLDVDT 417
             R  +Q+VFQDP  +LNPRM+V Q+I E   +H   L   +    +  ++ +VGL  + 
Sbjct: 349 KLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRERVAELLVQVGLSAEH 408

Query: 418 RHRYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLT 477
             RYP++FSGGQRQRIAIARAL L+P+ I+ DE  S+LD +VQAQV++LL  L+++  + 
Sbjct: 409 MSRYPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREMGIA 468

Query: 478 YLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVRLSL 529
           ++FI+HDL V+R    + +VM+ GE+VE G  + +F+ P   YT+ L+  SL
Sbjct: 469 FIFIAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQAYTRALLAASL 520