Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  462 bits (1189), Expect = e-134
 Identities = 247/527 (46%), Positives = 345/527 (65%), Gaps = 7/527 (1%)

Query: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64
           +L++ +L+V F   G A   T GVS  +  GETL ++GESGSGKSV+A+AI+ L+     
Sbjct: 6   LLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPG 65

Query: 65  HYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRG 124
              +GS+ +   D    SE   R + G RI MIFQ+P+  LNP++ IG QL E   +H  
Sbjct: 66  DICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGV 125

Query: 125 LRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPT 184
                A Q+AIE LG+VGI  PE +I+ YPH+ SGG+RQR+MI MA+   PE+LIADEPT
Sbjct: 126 ASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPT 185

Query: 185 TALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTL 244
           TALDVSVQAQIL+LLK LQ E G+A++ ITHDL +   +ADRV VM+SG++VE      +
Sbjct: 186 TALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAV 245

Query: 245 FAAPAHPYTQQLIN----ADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIK 300
           F  PAH YT+ LIN    AD R  P P       +L+ + +  ++ +  G+F +  A + 
Sbjct: 246 FENPAHSYTRTLINALPHADDRAPPRPARPAGKPILEVKNIDKFYTLSSGFFAK-PARLH 304

Query: 301 AVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKL-LASQGAIRFAGQDLQALKRREMLP 359
           AV ++SF +A G+++G+VGESGSGKST    +L L  AS G   F G+D+  + R+++L 
Sbjct: 305 AVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASGGEALFHGRDVLKMDRKQLLA 364

Query: 360 YRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQ-LNDDEIDHAICAVMQEVGLDVDTR 418
           +R K+Q+VFQDPYS++NPRM+V  ++ E  R+H   L        +  ++  VGL+ +  
Sbjct: 365 FRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVGLNPEHA 424

Query: 419 HRYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTY 478
            RYP++FSGGQRQRIAIARAL   PE ++ DE  S+LD +VQ QV+DLL +L+ +  L Y
Sbjct: 425 KRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAY 484

Query: 479 LFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLV 525
           +FI+HDL ++R      IVMK+GEIVEH  T+ +F NP H YT+QL+
Sbjct: 485 IFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLI 531



 Score =  183 bits (465), Expect = 1e-50
 Identities = 108/257 (42%), Positives = 145/257 (56%), Gaps = 9/257 (3%)

Query: 7   KIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSAHY 66
           K   LS GF          + +S  +A GET+ +VGESGSGKS  A  +L     G    
Sbjct: 288 KFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLL-----GLNEA 342

Query: 67  LSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRG-L 125
             G   F   D L+   + L   R  ++ M+FQ+P  S+NP   +   + E   IH+  L
Sbjct: 343 SGGEALFHGRDVLKMDRKQLLAFRR-KVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDIL 401

Query: 126 RATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPTT 185
             T    +  E LG VG+     K   YPH+ SGG+RQR+ IA AL  +PEL++ DE  +
Sbjct: 402 EKTRWRDRVTELLGLVGLNPEHAK--RYPHQFSGGQRQRIAIARALACDPELVVCDEAVS 459

Query: 186 ALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTLF 245
           ALDVSVQ Q++DLL  L+  LG+A +FITHDL IVR  ADR+ VM+SG++VE      +F
Sbjct: 460 ALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIF 519

Query: 246 AAPAHPYTQQLINADPR 262
             P H YT+QLINA P+
Sbjct: 520 RNPQHAYTRQLINATPK 536