Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  575 bits (1481), Expect = e-168
 Identities = 301/528 (57%), Positives = 383/528 (72%), Gaps = 6/528 (1%)

Query: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64
           +L ++NL V FG   +A     GVS TIA+GETLALVGESGSGKSVTA +I RLLP   A
Sbjct: 17  LLSVENLQVRFGAGPEAVDAVRGVSFTIAKGETLALVGESGSGKSVTALSITRLLPYPPA 76

Query: 65  HYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRG 124
            +  G+I F   D L      LR +RG RI MIFQEPM SLNPLH I +Q+ E L +H+G
Sbjct: 77  SHPGGAIFFDSEDLLHAPGARLRDVRGNRISMIFQEPMTSLNPLHSIERQVGEVLTLHKG 136

Query: 125 LRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPT 184
           L   A   + I+ L  VG+   E ++ A PHELSGG+RQRVMIAMAL NEP+LLIADEPT
Sbjct: 137 LHGKARRARVIDLLRLVGLPQVEGRLGALPHELSGGQRQRVMIAMALANEPDLLIADEPT 196

Query: 185 TALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTL 244
           TALDV++QAQIL LL  LQ+  GMA+LFITHDLSIVRR+ADRVAVM+ G +VET     L
Sbjct: 197 TALDVTIQAQILALLADLQKRFGMAILFITHDLSIVRRVADRVAVMKDGLIVETGTTAAL 256

Query: 245 FAAPAHPYTQQLINADPRGVP--VPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAV 302
           FAAP+HPYT+ L+ ++PRG P  VP   +AP +L  + L+VWFPI+ G  RRT  +IKAV
Sbjct: 257 FAAPSHPYTKALLASEPRGTPRLVP---NAPEILSCDDLKVWFPIRKGVIRRTVGHIKAV 313

Query: 303 TDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLASQGAIRFAGQDLQALKRREMLPYRS 362
             +SF+L  G++LG+VGESGSGK+T G+ +L+L++SQGAI F+G  L  L    M P R 
Sbjct: 314 DGISFSLKAGETLGVVGESGSGKTTLGLGLLRLVSSQGAIVFSGTRLDGLSNTAMRPLRR 373

Query: 363 KMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHA-ICAVMQEVGLDVDTRHRY 421
           ++Q+VFQDPY +L+PR+SV ++IGEGL VH    D     A +   + EVGLD  T+ RY
Sbjct: 374 RLQIVFQDPYGSLSPRLSVGEIIGEGLAVHGLAGDRAGRRALVTQALSEVGLDPATQDRY 433

Query: 422 PNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFI 481
           P+EFSGGQRQRIAIARALVLKPE I+LDEPTS+LD TVQAQ++DLL+D+Q ++ + Y+FI
Sbjct: 434 PHEFSGGQRQRIAIARALVLKPEVIVLDEPTSALDVTVQAQIVDLLRDIQTRHAIAYVFI 493

Query: 482 SHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVRLSL 529
           SHDL V+RAL    +VMK G++VE G  + +F+ P H YT+ L+  +L
Sbjct: 494 SHDLRVVRALAAQVLVMKDGKVVEAGSGEQIFQAPRHDYTRALLAAAL 541