Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., ABC transporter ATP-binding protein from Rahnella sp. WP5

 Score =  451 bits (1159), Expect = e-131
 Identities = 248/549 (45%), Positives = 342/549 (62%), Gaps = 29/549 (5%)

Query: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64
           VL + +L+  F       PV   +S  +  GETLA+VGESGSGKSVT+ +++RLL K  +
Sbjct: 14  VLSVKHLTTSFRGEDDWLPVVRDLSFDVYPGETLAIVGESGSGKSVTSLSVMRLL-KAQS 72

Query: 65  HYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRG 124
             + G +       L  S++ +R IRG  + MIFQEPM SLNP   IG+Q+ E+L  HRG
Sbjct: 73  SRIEGEVWLNQRSLLALSDKQMRDIRGNDMAMIFQEPMTSLNPTFSIGRQIAESLKRHRG 132

Query: 125 LRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPT 184
           + ++ A  + +  L KV I +   + + YPH+ SGG RQRVMIAMAL  +P+LLIADEPT
Sbjct: 133 MSSSEARAETLRLLEKVRIPNATKRFDEYPHQFSGGMRQRVMIAMALALKPKLLIADEPT 192

Query: 185 TALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTL 244
           TALDV++Q QILDL+K+LQ+E GMA+LFITHD+ +V  IADR  VM  G+ VE+ A   +
Sbjct: 193 TALDVTIQGQILDLIKTLQEEEGMAVLFITHDMGVVAEIADRTLVMYRGEAVESGATEDI 252

Query: 245 FAAPAHPYTQQLINADPR---------------------------GVPVPTAMDAPTLLQ 277
           F  P HPYT+ L+ A P+                            V    A     LL 
Sbjct: 253 FHRPQHPYTRALLAAVPKLGSMQGRDWPLRFPQINLQTGEASVPGEVAGTVASGLTPLLS 312

Query: 278 AEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLA 337
            + L   FP+ GG F R    + AV ++SF L +G++L LVGESG GKSTTG A+ +LL 
Sbjct: 313 VKNLSARFPVYGGIFSRQVGAVHAVENISFDLFQGETLSLVGESGCGKSTTGRAVTRLLK 372

Query: 338 SQ-GAIRFAGQDLQALKRREMLPYRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLN 396
              GAI F G D+  L +R++L  R ++Q++FQDP+++LNPRM +   + E +  H   N
Sbjct: 373 PHSGAIDFDGFDVMNLGKRDILQMRQRIQMIFQDPFASLNPRMRIGDALIEPMLQHKLHN 432

Query: 397 DDEIDHAICAVMQEVGLDVDTRHRYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLD 456
             +      +++Q+VGL  D   R+P+EFSGGQRQRI IARAL L P+ I+ DE  S+LD
Sbjct: 433 RSDAKEKAASLLQKVGLSPDMLRRFPHEFSGGQRQRICIARALTLDPKVIVADESVSALD 492

Query: 457 RTVQAQVLDLLKDLQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENP 516
            +V+AQV++LL DLQ+   L+YLFISHD+AV+  + H   VM  GEIVE G   ++F+NP
Sbjct: 493 VSVKAQVVNLLLDLQESMNLSYLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAAIFDNP 552

Query: 517 SHPYTQQLV 525
            H YT++L+
Sbjct: 553 QHAYTRKLM 561



 Score =  191 bits (486), Expect = 5e-53
 Identities = 114/285 (40%), Positives = 174/285 (61%), Gaps = 17/285 (5%)

Query: 5   VLKIDNLSVGFGIAGQ-------ARPVTEGVSLTIARGETLALVGESGSGKSVTANAILR 57
           +L + NLS  F + G        A    E +S  + +GETL+LVGESG GKS T  A+ R
Sbjct: 310 LLSVKNLSARFPVYGGIFSRQVGAVHAVENISFDLFQGETLSLVGESGCGKSTTGRAVTR 369

Query: 58  LLPKGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVE 117
           LL   S     G+I F   D +   +R +  +R  RI MIFQ+P  SLNP  +IG  L+E
Sbjct: 370 LLKPHS-----GAIDFDGFDVMNLGKRDILQMRQ-RIQMIFQDPFASLNPRMRIGDALIE 423

Query: 118 TLAIHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPEL 177
            +  H+    + A++KA   L KVG+  P++ +  +PHE SGG+RQR+ IA AL  +P++
Sbjct: 424 PMLQHKLHNRSDAKEKAASLLQKVGLS-PDM-LRRFPHEFSGGQRQRICIARALTLDPKV 481

Query: 178 LIADEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVE 237
           ++ADE  +ALDVSV+AQ+++LL  LQ+ + ++ LFI+HD+++V R++ RVAVM  G++VE
Sbjct: 482 IVADESVSALDVSVKAQVVNLLLDLQESMNLSYLFISHDMAVVERVSHRVAVMYLGEIVE 541

Query: 238 TNACHTLFAAPAHPYTQQLINADPRGVPVPTAMDAPTLLQAEKLR 282
                 +F  P H YT++L+ + P  VP P+       +Q ++L+
Sbjct: 542 IGPRAAIFDNPQHAYTRKLMASVP--VPDPSRRMLKRQMQVDELK 584