Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., ABC transporter ATP-binding protein from Rhodopseudomonas palustris CGA009

 Score =  432 bits (1111), Expect = e-125
 Identities = 242/528 (45%), Positives = 334/528 (63%), Gaps = 6/528 (1%)

Query: 1   MNDWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLP 60
           M D VL+IDNL V  G +G    V +G+SL +  GET+ LVGESGSGKSVT+   + LLP
Sbjct: 1   MTDNVLEIDNLVVRLGRSGHGDKVIDGISLNVRAGETMCLVGESGSGKSVTSLTTMGLLP 60

Query: 61  KGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLA 120
           KG      G I     + L  SER LR +R  R+ MIFQEPM +LNP+  +GKQ+ E L 
Sbjct: 61  KGVLQASGGEIRLAGENVLAASERRLRQLRASRMAMIFQEPMTALNPVVPVGKQIDEVLR 120

Query: 121 IHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIA 180
            H  L A    ++ ++ + +V +   E    +YPH LSGG+RQR+MIAMAL+ EP+LLIA
Sbjct: 121 FHTDLPARERRRRILDMMQQVRLPDVERIFASYPHRLSGGQRQRIMIAMALVLEPKLLIA 180

Query: 181 DEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA 240
           DEPTTALDV+ Q QIL L++ LQQ  G A+LFITHD+ +V  IADRVAVM+ G+LVET  
Sbjct: 181 DEPTTALDVTTQKQILTLIRELQQAHGTAVLFITHDMGVVAEIADRVAVMRQGRLVETGP 240

Query: 241 CHTLFAAPAHPYTQQLINADPRGVP--VPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAY 298
              +   P   YT+ L++A P  VP     A   P +L+A +L   +  +    R  +  
Sbjct: 241 LEAVLRRPQMEYTRNLLSAVPSLVPRAPRPANRTPVVLEANELGKVYRERSLLGRHRE-- 298

Query: 299 IKAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLL-ASQGAIRFAGQDLQALKRREM 357
           + A  D++ TL KG++LG+VGESGSGKST    I++L+  + G IR AG+++  L RR +
Sbjct: 299 VVAAQDVTLTLHKGRTLGIVGESGSGKSTVARCIVRLIDPTSGGIRLAGREISELSRRLL 358

Query: 358 LPYRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQEVGLDVDT 417
            P+R K+Q++FQDPY +LNPR+SV + I EG   +       +  A   +++ V L  D 
Sbjct: 359 RPHRQKIQIIFQDPYRSLNPRVSVGESIAEGPINYGMPRAQAMAKA-RQLLELVHLPADA 417

Query: 418 RHRYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLT 477
             R+P++FSGGQRQRIAIARAL L P+ ++ DE  S+LD +VQAQVL+LL ++Q +  + 
Sbjct: 418 ISRFPHQFSGGQRQRIAIARALALDPDVLVADEAVSALDVSVQAQVLNLLDEIQTRLGIA 477

Query: 478 YLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLV 525
            LFI+HDL V   +C    VM+ G +VE G    +  +P   YT+QL+
Sbjct: 478 LLFITHDLRVAAQICDDVAVMEKGRVVEQGPAAEVLTHPKQAYTRQLL 525



 Score =  173 bits (438), Expect = 2e-47
 Identities = 106/247 (42%), Positives = 149/247 (60%), Gaps = 11/247 (4%)

Query: 17  IAGQARPVT--EGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSAHYLSGSIHFG 74
           + G+ R V   + V+LT+ +G TL +VGESGSGKS  A  I+RL+        SG I   
Sbjct: 292 LLGRHREVVAAQDVTLTLHKGRTLGIVGESGSGKSTVARCIVRLIDP-----TSGGIRLA 346

Query: 75  DVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRGLRATAAEQKA 134
             +    S R LR  R  +I +IFQ+P  SLNP   +G+ + E   I+ G+    A  KA
Sbjct: 347 GREISELSRRLLRPHRQ-KIQIIFQDPYRSLNPRVSVGESIAEG-PINYGMPRAQAMAKA 404

Query: 135 IEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPTTALDVSVQAQ 194
            + L  V +  P   I+ +PH+ SGG+RQR+ IA AL  +P++L+ADE  +ALDVSVQAQ
Sbjct: 405 RQLLELVHL--PADAISRFPHQFSGGQRQRIAIARALALDPDVLVADEAVSALDVSVQAQ 462

Query: 195 ILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTLFAAPAHPYTQ 254
           +L+LL  +Q  LG+A+LFITHDL +  +I D VAVM+ G++VE      +   P   YT+
Sbjct: 463 VLNLLDEIQTRLGIALLFITHDLRVAAQICDDVAVMEKGRVVEQGPAAEVLTHPKQAYTR 522

Query: 255 QLINADP 261
           QL+ A P
Sbjct: 523 QLLEAAP 529