Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  575 bits (1483), Expect = e-168
 Identities = 287/521 (55%), Positives = 386/521 (74%), Gaps = 2/521 (0%)

Query: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64
           +L + +L V F   G+      GVS ++ RGET+ALVGESGSGKSV+A + + LL  G +
Sbjct: 14  LLSVRDLRVSFRQDGKVTEAVRGVSFSVGRGETVALVGESGSGKSVSALSTVSLL--GDS 71

Query: 65  HYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRG 124
             +SGS+ +   + +  SER LR +RG  I  IFQEPM SLNPLH I KQL E+LA+H+G
Sbjct: 72  ATVSGSVTYDGTEMVGASERHLRQVRGNDISFIFQEPMTSLNPLHTIEKQLAESLALHQG 131

Query: 125 LRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPT 184
           L   AA ++ ++ L +VGIR  E +++AYPH+LSGG+RQRVMIAMAL N+P++LIADEPT
Sbjct: 132 LGGAAARERIVDLLNRVGIRDAETRLDAYPHQLSGGQRQRVMIAMALANKPDILIADEPT 191

Query: 185 TALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTL 244
           TALDV++Q QILDLL  L+   GM +LFITHDLSIVRRIADRV VMQ+G++VE+     +
Sbjct: 192 TALDVTIQVQILDLLADLKASEGMGLLFITHDLSIVRRIADRVCVMQAGEIVESGPTAEI 251

Query: 245 FAAPAHPYTQQLINADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAVTD 304
           FA P HPYT++L++A+P G P P + DA  L++ E L+VWFPI+ G+ +RT  ++KAV  
Sbjct: 252 FANPQHPYTRKLLDAEPTGQPQPVSKDAKELIRTEDLKVWFPIQKGFLKRTVGHVKAVNP 311

Query: 305 MSFTLAKGQSLGLVGESGSGKSTTGMAILKLLASQGAIRFAGQDLQALKRREMLPYRSKM 364
            S ++  G++LG+VGESGSGK+T  +AI++L+AS+G + F GQDL+    R++   R+ M
Sbjct: 312 TSLSVRAGETLGIVGESGSGKTTLALAIMRLIASEGRVEFQGQDLRQWSTRDLRRLRADM 371

Query: 365 QVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQEVGLDVDTRHRYPNE 424
           Q+VFQDP+ AL+PRM+ AQ+I EGL +H+   D +    +  VM EVGLD     RYP+E
Sbjct: 372 QIVFQDPFGALSPRMTCAQIIAEGLAIHNVDQDRDPRDLVAEVMSEVGLDPAFMDRYPHE 431

Query: 425 FSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISHD 484
           FSGGQRQRIAIARA+VL+P+ ++LDEPTS+LD TVQ Q+++LL+DLQ++Y L YLFISHD
Sbjct: 432 FSGGQRQRIAIARAMVLRPKLVVLDEPTSALDMTVQVQIVNLLRDLQERYGLAYLFISHD 491

Query: 485 LAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLV 525
           L V+RA+ H  IVMK G++VE G    LF NPS PYTQQL+
Sbjct: 492 LNVVRAMSHKMIVMKQGDVVEAGSAAELFNNPSDPYTQQLL 532



 Score =  170 bits (431), Expect = 1e-46
 Identities = 95/231 (41%), Positives = 145/231 (62%), Gaps = 9/231 (3%)

Query: 29  SLTIARGETLALVGESGSGKSVTANAILRLLPKGSAHYLSGSIHFGDVDTLRCSERALRG 88
           SL++  GETL +VGESGSGK+  A AI+RL+         G + F   D  + S R LR 
Sbjct: 313 SLSVRAGETLGIVGESGSGKTTLALAIMRLIAS------EGRVEFQGQDLRQWSTRDLRR 366

Query: 89  IRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRGLRATAAEQKAIEWLGKVGIRHPEI 148
           +R   + ++FQ+P  +L+P     + + E LAIH   +         E + +VG+     
Sbjct: 367 LRAD-MQIVFQDPFGALSPRMTCAQIIAEGLAIHNVDQDRDPRDLVAEVMSEVGL--DPA 423

Query: 149 KINAYPHELSGGERQRVMIAMALINEPELLIADEPTTALDVSVQAQILDLLKSLQQELGM 208
            ++ YPHE SGG+RQR+ IA A++  P+L++ DEPT+ALD++VQ QI++LL+ LQ+  G+
Sbjct: 424 FMDRYPHEFSGGQRQRIAIARAMVLRPKLVVLDEPTSALDMTVQVQIVNLLRDLQERYGL 483

Query: 209 AMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTLFAAPAHPYTQQLINA 259
           A LFI+HDL++VR ++ ++ VM+ G +VE  +   LF  P+ PYTQQL+ A
Sbjct: 484 AYLFISHDLNVVRAMSHKMIVMKQGDVVEAGSAAELFNNPSDPYTQQLLAA 534