Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  572 bits (1473), Expect = e-167
 Identities = 288/530 (54%), Positives = 387/530 (73%), Gaps = 2/530 (0%)

Query: 1   MNDWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLP 60
           M+D VL++ NL VGF   GQ     +GVS  +A+GET+ALVGESGSGKSVTA + + LLP
Sbjct: 1   MSDAVLQVRNLRVGFRQDGQVTEAVKGVSFDVAQGETVALVGESGSGKSVTALSTVSLLP 60

Query: 61  KGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLA 120
             +   +SGSI +   + +   ER LR +RG  +  IFQEPM SLNPLH + KQ+ E+L 
Sbjct: 61  DSAE--VSGSITYAGTEMVGAPERDLRRVRGNDVSFIFQEPMTSLNPLHPLEKQITESLT 118

Query: 121 IHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIA 180
           +H+GL   AA  + IE L KVGIR  E ++ AYPH+LSGG+RQRVMIAMAL N P+LLIA
Sbjct: 119 LHQGLTGDAARARVIELLEKVGIRDAESRLGAYPHQLSGGQRQRVMIAMALANGPDLLIA 178

Query: 181 DEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA 240
           DEPTTALDV++QAQILDLL  L++  GM++LFITHDL+IVRRIADRV VMQ G++VET  
Sbjct: 179 DEPTTALDVTIQAQILDLLADLKEAEGMSLLFITHDLTIVRRIADRVCVMQGGEIVETGP 238

Query: 241 CHTLFAAPAHPYTQQLINADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIK 300
              +FA P HPYT++L+ A+P G P P   DAP + + + L+VWFPI+ G  RRT  ++K
Sbjct: 239 TAEIFANPQHPYTRKLLAAEPSGQPDPVPEDAPVVAETDSLKVWFPIQRGILRRTVGHVK 298

Query: 301 AVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLASQGAIRFAGQDLQALKRREMLPY 360
           AV + +  +  G++LG+VGESGSGK+T  +AIL+L++S+G I +AG+++Q  K R++   
Sbjct: 299 AVNNATLNVRAGETLGVVGESGSGKTTLALAILRLISSEGRIVYAGENIQGWKSRDLRRL 358

Query: 361 RSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQEVGLDVDTRHR 420
           R  MQVVFQDPY +L+PRM++AQ+I EGL VH      +    +  ++ EVGLD     R
Sbjct: 359 RKDMQVVFQDPYGSLSPRMTIAQIIAEGLGVHGLEPGADPRRMVAEILVEVGLDPAMMDR 418

Query: 421 YPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLF 480
           YP+EFSGGQRQRIAIARA++L+P+ ++LDEPTS+LD TVQ Q+++LL+ LQ+KY L Y+F
Sbjct: 419 YPHEFSGGQRQRIAIARAMILRPKLVVLDEPTSALDMTVQVQIVELLRALQRKYGLAYIF 478

Query: 481 ISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVRLSLL 530
           ISHDL V+RAL H  IVM+ G++VE GE + +FE P   YT+QL+  + +
Sbjct: 479 ISHDLKVVRALSHKVIVMRQGDVVEMGEGRQIFERPRSDYTKQLLAAAFM 528