Pairwise Alignments

Query, 198 a.a., TetR/AcrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 192 a.a., TetR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 53.1 bits (126), Expect = 3e-12
 Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 21/161 (13%)

Query: 3   RKCNFDREEKLHQAMTLFWQKGYANTAISDLVDHLQINRFSLYNAFGDKQKLYYEALDRY 62
           R   FDR++ L QAM  F  KGYA T++ DL     ++  S+Y AF +K+ L    +++Y
Sbjct: 2   RNAEFDRQQVLRQAMNAFIDKGYAKTSMQDLTKATGLHPGSIYCAFDNKRGLLLAVIEQY 61

Query: 63  LNLVSSPALKDLELE-----SAAWPELKAFLQHFAALQ-----REGNRGCFMQNALVEHA 112
                    +D + E      +A P  +   Q+ A +      ++  + C +  AL E A
Sbjct: 62  --------GQDRKAELTACFGSALPFPEQLKQYLAGIVDECQCKDTPKACLLTKALNEVA 113

Query: 113 DTDDEVLNKGHALFDHLLHLIARALNNAIQQGQI---AAHL 150
           + D+ + +   +  +     +      A+ +G++   AAHL
Sbjct: 114 EQDEMIRDAVQSHLESWQQALTTQFEQAVDRGELKGDAAHL 154