Pairwise Alignments

Query, 198 a.a., TetR/AcrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 210 a.a., transcriptional regulator, TetR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 60.8 bits (146), Expect = 2e-14
 Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 15/170 (8%)

Query: 7   FDREEKLHQAMTLFWQKGYANTAISDLVDHLQINRFSLYNAFGDKQKLYYEALDRYLNLV 66
           FD ++ L +A+ +FW+KG+  T+++DL   + IN+ SLY AFG+K++L+ +A++ Y    
Sbjct: 21  FDADDALAKALEVFWRKGFEGTSLTDLTQAMGINKPSLYAAFGNKEQLFLKAIELYEQRP 80

Query: 67  SSPALKDLELESAAWPELKAFLQHFAALQREGN-RGCFMQNALVEHADTDDEVLNKGHAL 125
            +     LE E+A        L    +L  E    GC +    +  ++        G A+
Sbjct: 81  CAFFYPSLEKETAYQVVESMLLGAATSLVDENQPHGCLIVQGALACSEA-------GQAI 133

Query: 126 FDHLL-------HLIARALNNAIQQGQIAAHLCADSLAPLVLTQMQGMRV 168
            + L+         +   L  A  +G + A      LA  V T +QGM V
Sbjct: 134 KETLITRRRDGEQALCERLQRAKDEGDLPADADPLLLARYVGTVLQGMAV 183