Pairwise Alignments

Query, 198 a.a., TetR/AcrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 193 a.a., transcriptional regulator, TetR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.8 bits (138), Expect = 1e-13
 Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 10/186 (5%)

Query: 3   RKCNFDREEKLHQAMTLFWQKGYANTAISDLVDHLQINRFSLYNAFGDKQKLYYEALDRY 62
           R   FDR + L  AM  F +KGY  T++ DL     ++  S+Y AF +K+ L   A+++Y
Sbjct: 2   RNAEFDRAQVLRGAMAAFMRKGYTKTSMQDLTQATGLHPGSIYCAFSNKRGLLIAAIEQY 61

Query: 63  LNLVSSPALKDLELESAAWPELKAFLQHFA--ALQREGNRGCFMQNALVEHADTDDEVLN 120
               +                LK +L +     +  +  + C +  AL E A+ DDE+ +
Sbjct: 62  QQDRNEQFKLIFSNTRPVLNNLKNYLDNVVVECISCDSQQACLLTKALNEIAEQDDEIQH 121

Query: 121 KGHALFDHLLHLIARALNN----AIQQGQIAAHLCADSLAPLVLTQMQGMRVLGKAQRHA 176
               +    L L   AL      A  QG +   L ++  A  ++  + G+R        A
Sbjct: 122 ----IISQNLQLWQNALTAQFELATSQGILQGELNSEQRAQYLMMGIYGLRTFAHTHPQA 177

Query: 177 NLEQGL 182
            + Q L
Sbjct: 178 EILQQL 183