Pairwise Alignments

Query, 261 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., Cystine ABC transporter, periplasmic cystine-binding protein FliY from Pseudomonas fluorescens FW300-N2E2

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 30/242 (12%)

Query: 24  VTIFADDAYPPYSYAEN-GRAVGIYPEILRAADVLMTEF--EIELQPIPWRRGLKLLEAG 80
           + I  +  YPP+S+ ++ G+  G   E    ++ L  E   +++LQ  PW   L  LE+ 
Sbjct: 42  IKIGLEGTYPPFSFVDDSGKLTGFEVEF---SEALAKELGVKVKLQTTPWAGILAALESK 98

Query: 81  RIFALLPPYYYPQRRPYIHPYSDP--ILDEEVVVFCQNA-WLSKRKSTEWPRDFYGLTIG 137
           R+ A++      + R   + +S+P  +   + +V  + A  L+ +K+ +      G+ +G
Sbjct: 99  RLDAVVNQVTISEERKKKYDFSEPYTVSGIQALVLTKKADELNIKKAADLDGKKVGVGLG 158

Query: 138 MNDGFSLGGQAFWKAVEEKKIEVKYANGNRVNLLKLRGDRIDCYVNDRISILWELTRLKR 197
            N          W   E    +VK  + +      LR  RID  + DR++ L    + K 
Sbjct: 159 TN-------YEQWVKAEVPGAQVKTYDDDPTKFQDLRVGRIDTILIDRLAALEYAKKAKD 211

Query: 198 EGIVDTVNFSMAAKISLEQGYIGFTNRNLEQYPYQSQFVAAFNSALAELKSSGQLDKIVG 257
             +         + I+L +G              + + +AA N A+ +L++ G L K+  
Sbjct: 212 TTVTSEAFSRQESGIALRKG--------------EPELLAAVNKAIEKLRADGTLKKLSE 257

Query: 258 RY 259
           +Y
Sbjct: 258 KY 259