Pairwise Alignments

Query, 261 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score = 55.5 bits (132), Expect = 1e-12
 Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 14/181 (7%)

Query: 5   LLFASLCLMSTCLHAKPQRVTIFADDAYPPYSYAENGRAVGIYPEILRAADVLMTEFEIE 64
           +LFA  CL  T    K + VT    + + PY Y ENG+A+G+  E   A        E+E
Sbjct: 11  VLFA--CLSFTARGEKLRIVT----EPWAPYVYEENGQALGLDYETT-AIVFQRLGIEVE 63

Query: 65  LQPIPWRRGLKLLEAGRIFALLPPYYYPQRRPYIHPYSDPILDEEVVVFCQNAWLSKRKS 124
            Q +PW+R L +L+ G     L  ++  +R   +    +P+ + E V+F  N      ++
Sbjct: 64  WQFLPWKRCLAMLDQGLADGALDIFHSSERDATLLYPGEPLSEVEFVLFYANDRPHPFRT 123

Query: 125 TEWPRDFYGLTIGMNDGFSLGGQAFWKAVEEKKIEVKYANGNRVNLLKLRGDRIDCYVND 184
            E   D  GLTIG + G+ L  Q F    +      + A  +  N  KL+  RID  + D
Sbjct: 124 LE---DLRGLTIGTSPGY-LYSQDF---RDSTLFTREPAPTHEANFGKLQRGRIDLLITD 176

Query: 185 R 185
           R
Sbjct: 177 R 177