Pairwise Alignments

Query, 261 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

 Score = 41.2 bits (95), Expect = 2e-08
 Identities = 55/253 (21%), Positives = 104/253 (41%), Gaps = 34/253 (13%)

Query: 18  HAKPQRVTIFADDAYPPYSYAENGRAV----GIYPEILRAADVLMTEFEIELQPIPWRRG 73
           HA+  R   F  + +PP+++A     +    G + +++ A    +   +  +Q +PWRR 
Sbjct: 20  HAEQVR---FVTEDFPPFTFAATTAPIDTPAGPFVDVIGAVCAQL-RIDCPIQLLPWRRA 75

Query: 74  LKLLEAGRIFALLPPYYYPQRRPYIHPYSDPILDEEVVVFCQNAWLSKRKSTEWPRDFYG 133
           L L E G +  +      P+R    H  +  ++     V+ ++A    R     P D  G
Sbjct: 76  LALAEGGEVDGIFTVIRSPERERAFH-LTRMLVTSRYGVYARSA---SRFVFHRPEDLAG 131

Query: 134 LTI---GMNDGFSLGGQAFWKAVEEKKIEVKYANGNRVNLLKLRGDRID----CYVNDRI 186
            T+   G +    + GQ   K  +   +E+   + NR  +  L+  R        VN   
Sbjct: 132 RTVAVYGPSGTSFVLGQHLTKVAD---VELILESDNRRLMRMLQAGRFGEQGVAVVNQ-- 186

Query: 187 SILWELTRLKREGIVDTVNFSMAAKISLEQGYIGFTNRNLEQYPYQSQFVAAFNSALAEL 246
            + W L  +++E + D      A ++      IG +   + +  ++      FN AL  L
Sbjct: 187 DVAWHL--IEQERLAD---IHEAGELQAVSYAIGLSRAAVSEAEFK-----RFNQALESL 236

Query: 247 KSSGQLDKIVGRY 259
            + G + +I+ RY
Sbjct: 237 IADGTVSRILRRY 249