Pairwise Alignments

Query, 261 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., extracellular solute-binding protein (RefSeq) from Shewanella loihica PV-4

 Score = 52.8 bits (125), Expect = 7e-12
 Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 14/233 (6%)

Query: 30  DAYPPYSYAENGRAVGIYPEILRAADVLMT-EFEI-ELQPIPWRRGLKLLEAGRIFALLP 87
           ++YPPY+Y E+ +  GI  ++L AA   +   F+I  +Q +PW RG KL   G+   L  
Sbjct: 35  ESYPPYNYRESHQLKGIAVDLLAAAARRVDGRFDIHSIQLVPWARGYKLTRTGKNTVLFS 94

Query: 88  PYYYPQRRPYIHPYSDPILDEEVVVFCQNAWLSKRKSTEWPRDFYGLTIGMNDGFSLGGQ 147
               P R P +  +  PI    +V+F +   +      E   + Y + +   D   +G Q
Sbjct: 95  TTRTPYREP-LFDWVGPISATRIVIFARADRVIHITDVE-QLNQYSIGVIAQD---IGEQ 149

Query: 148 AFWKA-VEEKKIEVKYANGNRVNLLKLRGDRIDCYVNDRISILWELTRLKREGIVDTVNF 206
           A   A +  +++   +   + V++  LR +R+D +  + +   +    +K+EG VDT  F
Sbjct: 150 ALLAAGIAREQLRRAHEATSLVHM--LRRERVDLWAYEEVVGRY---LMKQEG-VDTDEF 203

Query: 207 SMAAKISLEQGYIGFTNRNLEQYPYQSQFVAAFNSALAELKSSGQLDKIVGRY 259
            +   + + + Y  F+  +  +   + Q       A  E     Q + I+ +Y
Sbjct: 204 EVVFTLKVSELYYAFSRDSDPELRRRLQQGIDKVKATIEANGKTQYENILAKY 256