Pairwise Alignments

Query, 261 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., extracellular solute-binding protein family 3 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 48.5 bits (114), Expect = 2e-10
 Identities = 57/238 (23%), Positives = 93/238 (39%), Gaps = 22/238 (9%)

Query: 26  IFADDAYPPYSYAENG----RAVGIYPEILRAADVLMTEFEIELQPIPWRRGLKLLEAGR 81
           +F    YPP++Y E      R  G   EI+  A   M       + +PW R  + +  G 
Sbjct: 61  VFVTQQYPPFNYLERDGDTERVAGPVAEIIIMACERMG-VGCTFRLLPWARAQQEVRNGT 119

Query: 82  IFALLPPYYYPQRRPYIHPYSDPILDEEVVVFCQNAWLSKRKSTEWPRDFYGLTIGMNDG 141
              +    +   R+ ++H +  P++  E   F +     +  +   PRD  G  +G+  G
Sbjct: 120 ADGIFTIGFVSDRQQWLH-FCPPLMRAEYGFFVRTENPLRYVT---PRDVSGYRVGVY-G 174

Query: 142 FSLGGQAFWKAVEEKKIEVKYANGNRVNLLKLRGDRIDCYVNDRISILWELTRLKREGIV 201
            SL      +   +  I V  A  N    LKL   RID   ++R + L  +  L+     
Sbjct: 175 PSLTADILDQLARQVPITVDVATDNDAGFLKLAQGRIDAVFSNRENGLATIALLR----- 229

Query: 202 DTVNFSMAAKISLEQGYIGFTNRNLEQYPYQSQFVAAFNSALAELKSSGQLDKIVGRY 259
              N   A   S     + F++R   +       V AF +AL  L   G+L + + RY
Sbjct: 230 -IANLRYAGWHSRVDYTVAFSHRTAPEV------VEAFEAALRMLHREGELQRCLARY 280