Pairwise Alignments

Query, 261 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., ABC-type amino acid transport/signal transduction system, periplasmic domain protein from Marinobacter adhaerens HP15

 Score = 43.1 bits (100), Expect = 6e-09
 Identities = 63/270 (23%), Positives = 117/270 (43%), Gaps = 36/270 (13%)

Query: 3   IGLLFASLCLMSTCLHAKP-----QRVTIF--ADDAYPPYSYAENGRAVGIYPEILRAAD 55
           +G+L   L  +S+ + A       Q+V  F  + + YPPY   +  +  GI  +++    
Sbjct: 13  LGVLLLVLTALSSPVFASQDTSGEQKVFRFNISPNGYPPYLIGDQSQPSGIMWDVVSEVA 72

Query: 56  VLMTEFEIELQPIPWRRGLKLLEAGRIFALLPPYYYPQRRPYIHP-----YSDPILDEEV 110
             +  + +  + IP +R  ++L  G I A       P+ R +        ++D ++D E 
Sbjct: 73  QRLG-YRVIAEQIPRKRVDQMLLDGYIDAT------PRAREWADDPEKFLFTDAVVDIEE 125

Query: 111 VVFCQNAWLSKRKSTEWPRDFYGLTIGMNDGFSLGG-QAFWKAVEEKKIEVKYANGNRVN 169
           V F   A +      E P D    TI  + G+     + +++    ++ +V  +    + 
Sbjct: 126 VFF---APVKSSFHYESPDDLISKTIVTHLGYRYPLLEPYFEEGRIRRFDV--SRDKDMF 180

Query: 170 LLKLRGDRIDCYVNDRISILWELTRLKREGIVDTVNFSMAAKISLEQGYIGFTNRNLEQY 229
              L GDR D  V DR+   W L   + EG+    + S        +    +  R + + 
Sbjct: 181 TFVLHGDRFDAAVADRLVGKWIL---RNEGLRQHFDIS-------NESISNYGFRLMLRK 230

Query: 230 PYQSQFVAAFNSALAELKSSGQLDKIVGRY 259
            +QS F + FN  LA++K++G+LD I+  Y
Sbjct: 231 DWQS-FASQFNEELAKMKANGELDAILANY 259