Pairwise Alignments

Query, 261 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., extracellular solute-binding protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 42.7 bits (99), Expect = 8e-09
 Identities = 56/237 (23%), Positives = 97/237 (40%), Gaps = 28/237 (11%)

Query: 30  DAYPPYSYAENGRAVGIYPEILRAADVLMTEFEIELQPIPWRRGLKLLEAGRIFALLPPY 89
           D +PP+   +    VGI  +IL+A    +    + +   PW R LK+LE G   A++   
Sbjct: 43  DVWPPFRIEQETGLVGIDVDILKALSTSLG-LRLRISRAPWGRCLKMLETGAADAMIGLA 101

Query: 90  YYPQRRPYIH--PYSDPILDEEVVVFCQNAWLSKRKSTEWPRDFYGLTIGMNDGFSLGGQ 147
              +R  YI   P S         +         R++     D  G+ +    G+    +
Sbjct: 102 KSAEREVYIRYVPTSYYTCSPRFYILA-----GARRAVLTYDDLEGMRV----GYVAQSR 152

Query: 148 AFWKAVEEKKIEVKYANGNRVNLLK-LRGDRIDCYVNDRISILWELTRLKREGIVDTVNF 206
            F     + K++ KYA      LL+ L   R+D  V     + +EL      G+++ V  
Sbjct: 153 YFEPFDSDTKLQ-KYAVPTERQLLELLLAGRVDVMVGTDCQVDYELA---EAGLLERVVV 208

Query: 207 SMAAKISLEQGYIGFTNRNLEQYPYQSQFV---AAFNSALAELKSSGQLDKIVGRYI 260
           +     +  + Y+GF+ +        S+FV   A F+ A+ +L   G L +I   Y+
Sbjct: 209 APYRPDAHTRLYLGFSRK--------SRFVPRIALFDDAMRDLLEKGALKQIRASYL 257