Pairwise Alignments

Query, 263 a.a., Zn-dependent protease from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 86.7 bits (213), Expect = 9e-22
 Identities = 76/266 (28%), Positives = 119/266 (44%), Gaps = 43/266 (16%)

Query: 2   KKTQLALTLLMTLGLAACSASPTGRNQLLLFSDNDMSQLGA---KSFTQMKQEI------ 52
           K    ++  LM LG AA S           F++ND+  LG     +F+  K+ I      
Sbjct: 11  KPLAASVLALMLLGGAAKS-----------FANNDLPDLGTAAVNTFSLEKEMIYGDAYM 59

Query: 53  -------PISKDAKTNAYVQCVTKAIIAQVPKQSSFEQWEVVVFESDQVNAFALPGGKIG 105
                  P+  D   + Y+  +   ++A      +   +   + ++D++NAFA  GG + 
Sbjct: 60  RVIRSSAPMLNDPVLSQYLTELGNKLVAHATGVKT--PFYFFLLQNDEINAFAFFGGHVA 117

Query: 106 VYTGLLKVAVNQDQLATVIGHEIAHVLSNHSNERLSQSQLAN-------AGLQLTDIAIG 158
           V+TGL   A N+ +LA+V+GHEI HV   H    L   Q           G  L  IA+ 
Sbjct: 118 VHTGLFLNADNESELASVLGHEITHVTQRHLARSLEAQQKTGPATVAGLLGAILLTIAVP 177

Query: 159 ASEYAQYRNLTMSALGVGVQYGVILPYGRSQESEADILGLALMARAGFDPYQSIELWKNM 218
            +  A     T  A+    +    + Y R  E EAD +G+ ++  AGFDP  S E +  +
Sbjct: 178 QAGMAAL--ATTQAMATQSK----INYTRLHEKEADRIGMQILVDAGFDPNASAEFFGKL 231

Query: 219 A-KASGGKQPPELLSTHPSHSTRISD 243
           A +      PP++L THP   +RIS+
Sbjct: 232 ASRYRFTTTPPQMLLTHPLPESRISE 257