Pairwise Alignments

Query, 263 a.a., Zn-dependent protease from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  279 bits (713), Expect = 5e-80
 Identities = 151/270 (55%), Positives = 197/270 (72%), Gaps = 12/270 (4%)

Query: 1   MKKTQLALTLLMT-LGLAACSA--SPTGRNQLLLFSDNDMSQLGAKSFTQMKQEIPISKD 57
           MK  +L+L L+   LGL AC+   SPTGR+Q LL+S + M Q+G  SF +MK++  IS +
Sbjct: 1   MKSKRLSLVLMTAALGLTACATTQSPTGRSQTLLYSSSQMQQMGDASFAEMKKQQKISGN 60

Query: 58  AKTNAYVQCVTKAIIAQVPKQSSFEQWEVVVFESDQVNAFALPGGKIGVYTGLLKVAVNQ 117
            K   YV CV   + A +P Q+  ++W+VV+F+S+QVNAFALPGG IGVYTGLLKVA   
Sbjct: 61  KKLTQYVNCVANRVTAVLPDQT--QKWDVVLFDSEQVNAFALPGGHIGVYTGLLKVASTP 118

Query: 118 DQLATVIGHEIAHVLSNHSNERLSQSQLANAGLQLTDIAIGASEYAQYRNLTMSALGVGV 177
           DQLATV+GHE+AHVL+ H NE++S+SQ+   G+Q+ D A+GA   +  R+L MSALG+G 
Sbjct: 119 DQLATVLGHEVAHVLAQHGNEQVSRSQMTGMGMQIADAALGAGGVSN-RDLYMSALGLGA 177

Query: 178 QYGVILPYGRSQESEADILGLALMARAGFDPYQSIELWKNMAKASGGKQPPELLSTHPSH 237
           Q GVILP+GR+QESEADI+GL LMARAGFDP QS+ LW+NM+KA GGK  PELLSTHPS+
Sbjct: 178 QVGVILPFGRAQESEADIMGLELMARAGFDPAQSVVLWQNMSKAGGGK-GPELLSTHPSN 236

Query: 238 STRISDLSATISTLPP-HQGSKA----QCA 262
           + RI+ L      + P +Q +KA    QCA
Sbjct: 237 NNRIAQLEQLQGQMQPLYQSAKANIKNQCA 266