Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., ABC peptide transporter, periplasmic ligand binding protein from Pseudomonas fluorescens FW300-N2E2

 Score = 53.5 bits (127), Expect = 2e-11
 Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 11/147 (7%)

Query: 134 LNPQKPMRRSEQHIARQVFSGLTRLDEEEQLQPDLAHAWQALSDTHWRFYLRPGVRFHNG 193
           L+P K    ++       ++GLTR D     Q +LA        T W   LR  V FHNG
Sbjct: 88  LDPAKGSSSTDYVRHYMFYNGLTRFDSHMVPQLELAERMDTTDATLWVITLRKEVTFHNG 147

Query: 194 NLLTTELIVQNLWQ-------LRLLNLFAHIDRVDSPYPWAVDVHLQKPDTRLPLLLAEA 246
             LT   +V +L +        ++L L      V +     V + L  P+  LP +LA +
Sbjct: 148 KGLTAADVVFSLMRHKDPITGSKVLPLAEQFAEVKATGTHEVQIRLSGPNAELPSILAIS 207

Query: 247 CAKILPAESDRNPDFDLMPVGTGPYKV 273
              I+P   +   DF+   +GTGP+KV
Sbjct: 208 HLLIVP---EGTSDFN-QGIGTGPFKV 230