Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 538 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 51.6 bits (122), Expect = 8e-11
 Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 27/200 (13%)

Query: 127 YYRQLSMLNPQKPMRRSEQHIARQVFSGLTR-LDEEEQLQPDLAHAWQALSDTH-WRFYL 184
           Y   +S L+P          + + +F GL   +    +L+PDLA +++   D   + F L
Sbjct: 34  YKDDVSTLDPAIGYDWQNWSMIKSLFDGLMDYVPGTTELRPDLAESYEISEDGKIFTFKL 93

Query: 185 RPGVRFHNGNLLTT-------ELIVQNLWQLRLLNLFAHIDRVDSPY------------- 224
           R GV+FHNG  LT        E +V    Q      FA I  V+                
Sbjct: 94  RKGVKFHNGRELTAQDVKYSIERVVNPATQSPGAGFFATIKGVEEASAGKGGELSGITVQ 153

Query: 225 -PWAVDVHLQKPDTRLPLLLAEACAKILPAE--SDRNPDFDLMPVGTGPYKVV-LNDEKR 280
            P  +   L +PD     ++A   A ++P E       DF   PVG+G +K+      +R
Sbjct: 154 DPHTIRFELTRPDATFLHVMALNFAHVVPKEEVEKHGADFGKNPVGSGAFKLAEWTLGQR 213

Query: 281 LVLQAFDGYFG-FRPLLDRV 299
           LV + F  Y+    P LDR+
Sbjct: 214 LVFERFTDYWNEGLPKLDRI 233