Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., putative periplasmic solute-binding protein from Klebsiella michiganensis M5al

 Score =  178 bits (451), Expect = 6e-49
 Identities = 147/571 (25%), Positives = 254/571 (44%), Gaps = 39/571 (6%)

Query: 9   QFETLFEHFQGQDVETQLEDVTDILFCTRRNARIVLNKMEEEGWIEWHPAAGRGKLSQLI 68
           Q++ L+E   G+  +  + ++ +  FC+ R+ R +L + +E GW+ W  ++GRGK   L 
Sbjct: 9   QYQRLWEPSSGEPQQVTVGELAERCFCSERHIRTLLRQAQESGWLRWQASSGRGKRGLLQ 68

Query: 69  FKRSRADVSENLARRYLNEGKIGQAFAVLDQDAAKLTQVIESYLGVQHQEGLQVVRLPYY 128
           F ++   +   +  + L++G+   A  +      +L  ++  +LG Q Q     +R+PYY
Sbjct: 69  FYKAPETLRNEMMEQALSKGQQQNALELAQLAPVELKALLSPFLGGQWQNDTPTLRIPYY 128

Query: 129 RQLSMLNPQKPMRRSEQHIARQVFSGLTRLDEEEQLQ-PDLAHAWQALSD-THWRFYLRP 186
           R L  L P     R+EQH+A ++FSGLTR D        DLAH W+   D   W FY+R 
Sbjct: 129 RPLEPLRPGFMPGRAEQHLAGEIFSGLTRFDAHSTCPIGDLAHHWEVSPDGLRWHFYIRS 188

Query: 187 GVRFHNGNLLTTELIVQNLWQL----RLLNLFAHIDRVDSPYPWAVDVHLQKPDTRLPLL 242
            + +HNG+ + T  + Q L  L     L  LFA I  ++  +   + + L + D  LP  
Sbjct: 189 TLFWHNGDPIKTSQLQQRLLMLLQLPALRTLFASISEINVTHSQCLTITLHRADYWLPFR 248

Query: 243 LAEACAKILPAESDRNPDFDLMPVGTGPYKVVLNDEKRLVLQAFDGYFGFRPLLDRVEVW 302
           LA  C+ +       +PD     +G+GP+++ L   + + L+    Y    PLL  VE W
Sbjct: 249 LASYCSVL------AHPDDP--AIGSGPFRLKLFTPELVRLENHQRYHLTHPLLQAVEYW 300

Query: 303 VIDEVHSSMVFPSLSNPMKTARGSSTEEVEL-------DPGCTYLLLNRRNGVAKDEHWA 355
           +  ++    +  S  +P++   G   E   L         G  YL L +   + K +  A
Sbjct: 301 ITPQLFEQDLGTSCRHPVQITIGDPDELTRLRQVSNSISLGFCYLTLRQSPRLNKAQ--A 358

Query: 356 RYLTDKLNALNLFRLLPEEKIIELGVLPAYGLKPGWYHHSAAAQRTLP-PESKELTIAYH 414
           + L   ++   L   LP   + E  + P+  + PGW           P PE   LT+ YH
Sbjct: 359 QRLVSLIHRSTLLETLP---LDEDPIAPSNEILPGWSIPQGPENYDTPLPE--RLTLLYH 413

Query: 415 AQHPMFPTVANAIKQLLSQDGITVNVIKYE----HTVVETENVDIWIKPMGIANHRDDAL 470
               +   +A  ++Q L++ G  + +I ++             D+ +    I      AL
Sbjct: 414 LPVELH-AMAEQLRQRLAELGCELTIIFHDAKNWDGCGHFAKADLMMGDRLIGEAPVYAL 472

Query: 471 AGWLLNYSDIEFLSKGEDFNQWVSLIDAWRA---DSSALFPAKELGKSLVEKHQLIPMFH 527
             WL   +    L  G  +    + +DA +A   + S     + +   L++   + P+F+
Sbjct: 473 EQWLRCDALWPNLLTGAQYAHLQATLDAVQALPDERSRSEALRNVFNRLMDDAIMTPLFN 532

Query: 528 CWLGISKDQCGALQNAKCNALGWFDFSQVWV 558
               IS      +   + NA GWFDF+  W+
Sbjct: 533 YNYRISAPP--GVNGLRLNARGWFDFASAWL 561