Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., transcriptional regulator SgrR from Klebsiella michiganensis M5al

 Score =  334 bits (857), Expect = 5e-96
 Identities = 194/564 (34%), Positives = 302/564 (53%), Gaps = 20/564 (3%)

Query: 1   MSSPRLRVQFETLFEHFQGQDVETQLEDVTDILFCTRRNARIVLNKMEEEGWIEWHPAAG 60
           MSS RL+ QF  L++   G+  ET L ++ ++L C+RR+ R +LN ME  GW+ W   AG
Sbjct: 1   MSSGRLQQQFIRLWQCCDGKSQETTLNELAEMLSCSRRHMRTLLNMMEARGWLTWEAEAG 60

Query: 61  RGKLSQLIFKRSRADVSENLARRYLNEGKIGQAFAVLDQDAAKLTQVIESYLGVQHQEGL 120
           RGK S+L F  +   + +  A   L + +I Q   ++  D A + Q++ S+LG   ++G 
Sbjct: 61  RGKRSRLAFLYTGLALQQQRAEDLLEQDRIDQLVQLVG-DKAAVRQMLVSHLGRSFRQGR 119

Query: 121 QVVRLPYYRQLSMLNPQKPMRRSEQHIARQVFSGLTRLDEEE-QLQPDLAHAWQALSDTH 179
            ++R+ YYR +  L P   +RRSE HIARQ+FS LTR++EE  +L+ D+AH WQ ++ TH
Sbjct: 120 HILRVLYYRPMKNLLPGSALRRSETHIARQIFSALTRVNEENGELEADIAHHWQQITPTH 179

Query: 180 WRFYLRPGVRFHNGNLLTTELIVQNLWQLRLLNLFAHIDRVDSPYPWAVDVHLQKPDTRL 239
           WRF+LRPG+ FH+G  L  E ++ +L +   L LF+HI+R+DSP  W +D+HL +PD  L
Sbjct: 180 WRFFLRPGIHFHHGRELEMEDVITSLQRSNALPLFSHIERIDSPTAWTLDIHLSQPDRWL 239

Query: 240 PLLLAEACAKILPAESDRNPDFDLMPVGTGPYKVVLNDEKRLVLQAFDGYFGFRPLLDRV 299
           P LL++  A ILP E     +F  +PVGTGPY VV N++ +L + AFD YFG+R L+D V
Sbjct: 240 PWLLSQVPAMILPHEWQSMDNFSSIPVGTGPYSVVRNNQNQLKIHAFDDYFGYRALIDEV 299

Query: 300 EVWVIDEVHSSMVFPSLSNPMK-TARGSSTEEVELDPGCTYLLLNRRNGVAKDEHWARYL 358
            VWV+ E+      P+    ++ T +     E  L+ GC YLL + R+ +  +    ++L
Sbjct: 300 NVWVLPEISEE---PNGGLTLQGTTQSEKAVESRLEEGCYYLLFDARSPLGANAAVRQWL 356

Query: 359 TDKLNALNLFRLLPEEKIIELGVLPAYGLKPGWYHHSAAAQRTLPPESKELTIAYHAQHP 418
           +      +L     E    +    PAYGL P W HH+ +     PP  + + + Y+  H 
Sbjct: 357 SYLFQPASLLYHAGEH--YQGNWFPAYGLLPRW-HHARSHACEKPPGLETVRLTYYQDHV 413

Query: 419 MFPTVANAIKQLLSQDGITVNV--IKYEHTVVETENVDIWIKPMGIANHRDDALAGWLLN 476
               +   +  LL++  + + +  ++Y+         D+W+         D +L  WL  
Sbjct: 414 EHRVIGGIMATLLAEHQVKLEIQELEYQEWHRGEAVSDVWLNSANFTLPIDFSLFAWLYE 473

Query: 477 YSDIEFLSKGEDFNQWVSLIDAWRADSSALFPAKELGKSLVEKHQLIPMFHCWLGISKDQ 536
              I      +    W      WRA    L PA    + L+    ++P+ H WL I   +
Sbjct: 474 VPLIRNCIPID----WEEDASRWRA--GELNPA-TWSQQLLANQTVVPLIHHWLMIQGQR 526

Query: 537 CGALQNAKCNALGWFDFSQVWVKP 560
             +++  + N LGWFDF   W  P
Sbjct: 527 --SMRGVRMNTLGWFDFKSAWFAP 548