Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., oligopeptide/dipeptide ABC transporter, periplasmic oligopeptide/dipeptide-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 55.1 bits (131), Expect = 7e-12
 Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 49/185 (26%)

Query: 151 VFSGLTRLDEEEQLQPDLAHAWQALSDTHWRFYLRPGVRFHNGNLLTTELIVQNLWQLR- 209
           VF  L R   + + +P LA  W+ ++ T  RF+LR GV+FH+GN  T + +   L +L+ 
Sbjct: 58  VFDPLVRWTPDMKFEPRLAEKWEQINPTTMRFHLRKGVKFHSGNPFTAKDVAWTLDRLKK 117

Query: 210 --------------------------------LLNLFAHIDRVDSPYPWAVDVHLQKPDT 237
                                           ++NL  +I  +DS +    D   Q  D 
Sbjct: 118 SPDFKGLFIKFAEPKVIDDNTIDIITTEPYGLVMNLATYIFPMDSKFYTGTDAKGQPKD- 176

Query: 238 RLPLLLAEACAKILPAESDRNPDFDLMPVGTGPYKVVLNDE-KRLVLQAFDGYFGFRPLL 296
                     A +    S  N +      GTGPY V   ++  +L+L+A  GY+G R  +
Sbjct: 177 ----------AIVKSGYSFANDNAS----GTGPYSVAEREQGVKLILKANKGYWGKRGNV 222

Query: 297 DRVEV 301
           D +E+
Sbjct: 223 DTIEL 227