Pairwise Alignments

Query, 698 a.a., TonB-dependent hemoglobin/transferrin/lactoferrin family receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 836 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

 Score = 79.3 bits (194), Expect = 7e-19
 Identities = 63/231 (27%), Positives = 114/231 (49%), Gaps = 33/231 (14%)

Query: 6   MYKKSLLSSAIMLALVP----SAY--------ADDYASFDEVVVSTTRLNTQITDTAASV 53
           M K S L++A+ L+L+     S Y        A++ ASF+ + V+ +R+  Q  +TA+ V
Sbjct: 1   MIKTSRLAAAVKLSLIATVSTSGYFVANNAVAAEESASFERIAVTGSRIQRQDMETASPV 60

Query: 54  AVINASDIEQQMAEDIEGLFKYTPGV------TLTTNSRQGVQGINIRGIEGNRIKVIVD 107
            VI+AS I  +    ++ + +  P +      + T N   GV  +++RG+  +R  V+++
Sbjct: 61  TVIDASAIRAEGYNSVDEILQAQPAMAGMAVGSTTNNGADGVAQVDLRGMGASRTLVLLN 120

Query: 108 GVAQPNQFDSGNSFLNSSRVDIDTDMVKSVEIVKGAASSLQGSDAIGGIVAFETKDPADI 167
           G    N     +S ++ + + +   M+  VEI+K  AS++ GSDAI G+V   TK   + 
Sbjct: 121 GRRMVNSGSGADSAVDLNTIPV--AMIARVEILKDGASAVYGSDAIAGVVNIITKKDFE- 177

Query: 168 LKGRNMGGYAKLNYSSSDKTFSESIALA------NKSGDLESLVAYTRRDG 212
                 G    +N  ++DK   E++ ++         G+    VAY+ R G
Sbjct: 178 ------GFQLDINGGATDKGDGENVEISALYGFNTDGGNYTFGVAYSDRGG 222



 Score = 34.3 bits (77), Expect = 3e-05
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 14/83 (16%)

Query: 439 SALTARLGTVYKLNQENRLFAQISQGFRAPDFQELY------YSF-----GNPAHGYV-- 485
           +A T ++G  Y+   +  L A  + GFRAP+  EL+      Y +     GN     +  
Sbjct: 538 NASTWKIGLTYEATDDLMLRAVAATGFRAPNVSELFGGNVGSYDYLDDPWGNEQDPQILV 597

Query: 486 -FKPNPNLEAEDSVSYELGWRYN 507
            +  +P+L+AE S SY  G  Y+
Sbjct: 598 NYTSDPDLKAESSESYTAGLVYS 620