Pairwise Alignments

Query, 698 a.a., TonB-dependent hemoglobin/transferrin/lactoferrin family receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 737 a.a., TonB-dependent heme receptor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  100 bits (248), Expect = 3e-25
 Identities = 155/707 (21%), Positives = 288/707 (40%), Gaps = 105/707 (14%)

Query: 47  TDTAASVAVINASDIEQQMAEDIEGLFKYTPGVTLTTNSRQGVQGINIRGI-EGNRIKVI 105
           T T    A+I+ ++IE+  A     +     G  +   +R G + IN+ G  E     V 
Sbjct: 56  TMTKPGEAIISMAEIEEMQATTFAEVIDDMAGAHIDGGTRSGGERINVWGFGETEDFNVY 115

Query: 106 VDGVAQP-NQFDSGNSFLNSSRVDIDTDMVKSVEIVKGAASSLQGSDAIGGIVAFETKDP 164
           VD       Q+  G+ FL       D D++K VE++KGA     G+   GG +   TK  
Sbjct: 116 VDNAPVGFEQYRYGSFFL-------DPDLIKRVEVIKGAHDVRSGNGGFGGAMYVVTKSA 168

Query: 165 ADILK-GRNMGGYAKLNYSSSDKTFSESIALANKSG-DLESLVAYTRRDGQEI--QNFGS 220
            D LK  +++G   K +Y+S++   S +  +  ++   L  L+ +TRRD Q++   N  +
Sbjct: 169 DDFLKYDQSVGARVKASYASNNDAQSYTGTVYGRANQQLSGLLHFTRRDAQDVTLANGEA 228

Query: 221 PDQQDNNANNLLVKLQYQ-------LNPKHRLEFSGNYIRNK-------NDLENLEFSGY 266
            +      NN L K+ Y+       L+  H L+       N+       +D    ++  Y
Sbjct: 229 FEYSGYEQNNYLGKVDYEQGDHQLMLSVTHYLDEGRKPWANRRGPMPAISDFNIRKYGSY 288

Query: 267 KNASGTDETTQYQLGIKHIWDA--EFSLADRITWQFDVVGKEETG--------ITDRTSK 316
           + A     TT Y     + W A   +S ++ +     VV                ++ + 
Sbjct: 289 EQA--LYATTAYNTYEDNTWSANYRYSPSNPLIDTQIVVSHSANARHWIRPPIAWEKMTV 346

Query: 317 SNGNIQKKDYLYSDKGFSFDSQLDKSFMVSNTEHYIVYGFSLSDKDIENTNQEFNSIGKN 376
           S GN   + +L   + +     +D + +     H I  G  L  + ++ T+  FN   + 
Sbjct: 347 SVGNFGHESWLDYKRDY-----IDINNLSVVGAHEITAG--LQFRSLDRTSLVFNKSYEK 399

Query: 377 N--------VIFYIPNASEKRYGFFIQDEIAF-DNLIVTPGIRFDSFETKPGDTSANPSL 427
           N          +Y P   +  Y  +++D I+  D+L +TP +R+D F    G  +  P  
Sbjct: 400 NPEKNFGWYTPYYQPEGRQDTYAAYLRDAISLTDDLTITPSLRYD-FVYSVGKPNIAPDY 458

Query: 428 NDAS---EYKKYSDSALTARLGTVYKLNQENRLFAQISQGFRAPDFQELYYSFGNPAHGY 484
           ND +   +Y     S  + RLG  Y+L    R+    +   +AP   E+Y      A   
Sbjct: 459 NDIAAGHDYSSTHHSGFSPRLGVDYQLTPNTRVNFDYAYSLQAPVVDEIYAV--QYAKAS 516

Query: 485 VFKPNPNLEAEDSVSYELGWRYNADSVSNELSIFYSDYDNFIDSQIVSGSFKTRDAVHQS 544
           +   + ++E E   +++LG       + N+ +  ++D D  + +QI   +   RD + Q 
Sbjct: 517 ITATSRDIEVERLHAFKLG-------LINQQTDLFADQD-ALSTQITVYANLGRDDIAQR 568

Query: 545 ---------------INIDKATIKGIELSNQFFWDRFMPIVGFSSRIAAAYTEGKD---- 585
                           N+D   I G +L +Q+ +  F       S +A ++ +G+     
Sbjct: 569 RGAKSDPNQAIQSGYTNLDGYEIYGADLESQYRYQDFF------SDLAVSWLQGEHRGSL 622

Query: 586 ----GNGKPLNSVSPWNAVTGINYDSENNWGTAVNLT-YTAKKKASE--INGDYQPISSA 638
               G  + L +++P +    +     ++   A   T Y A+    E  I     P  + 
Sbjct: 623 KDSLGEDEYLANIAPLDIQLRVGMYITDSISVAWQGTWYDAQDNVPEGDIFNAESPSENY 682

Query: 639 TVIDVTAYYKP---IKDLTLRAGVFNLTDEEYYNWNDVRGLPSEDKD 682
            + ++   Y+P   +K L++R    NLT+++   +    G+P+  +D
Sbjct: 683 FLQNIYLAYEPLDSLKGLSIRLMAKNLTNQQVTPFLS-DGIPAPGRD 728