Pairwise Alignments

Query, 698 a.a., TonB-dependent hemoglobin/transferrin/lactoferrin family receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 747 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  218 bits (555), Expect = 8e-61
 Identities = 196/726 (26%), Positives = 316/726 (43%), Gaps = 73/726 (10%)

Query: 35  VVVSTTRLNTQITDTAASVAVINASDIEQQMAEDIEGLFKYTPGVTLTTNSRQGVQGINI 94
           +VVS +R+   I   A S+ VI+   IE+ M+ D   LF+    V +   + +    + I
Sbjct: 33  IVVSGSRMEQNIEQVAGSILVIDEEAIERNMSNDFGSLFRNESAVDIKGGAGKPTS-VTI 91

Query: 95  RGIEGNRIKVIVDGVAQPNQFDS--GNSFLNSSRVDIDTDMVKSVEIVKGAASSLQGSDA 152
           RGI GNR+ ++ DGV   NQ+ S  G     + R   +   +K +E+VK AAS++ GSDA
Sbjct: 92  RGIGGNRVMMVKDGVRVNNQYASPLGPGAEGTGRGLTEVQSLKQIEVVKAAASTMYGSDA 151

Query: 153 IGGIVAFETKDPADILKGRNMGGYAKLN--YSSSDKTFSESIALANKSGDLESLVAYTRR 210
           +GG+V   TKD +D L+G +   Y  LN  YS  +  +S     A    D E+L+ Y  R
Sbjct: 152 LGGVVVMRTKDASDYLRGEDY--YVSLNAGYSGINNEYSGGFTSAAAYSDFENLLTYQHR 209

Query: 211 DGQEIQN-FGSPDQQDNNANNLLVKLQYQLNPKHRLEFSGNYI-----RNKNDLENLEFS 264
            G+E+ N F +  + D   ++LL K +Y+ N    ++ + +Y+     R ++ L   +  
Sbjct: 210 KGEELPNYFDTQPESDLLQDSLLFKSKYRFNEHTTVQLTLDYLEQTLERWEDKLNRAQVP 269

Query: 265 GYKNASGTDETTQYQLGIKHI-WDAEFSLADRIT---WQFDVVGKEETGITDRTSKSNGN 320
             +    TD  TQ   G   +  D    L D +T   +       E     D  + +   
Sbjct: 270 --QERIDTDRDTQVINGALQLRSDKATYLHDDLTVTAYFGQTEQLEHRDYFDLRTAARPL 327

Query: 321 IQKKDYLYSDKGFSFDSQLDKSFMVSNTEHYIVYGFSLS-DKDIENTNQEFNSIG---KN 376
            + +DY + D+     S   K        H + YG      + + + N    S G   + 
Sbjct: 328 TEYRDYEFKDQRLGLTSTFSKYIGAEGYGHQLTYGMDYEWSQMMRHRNNNIASNGGDWQT 387

Query: 377 NVIFYIPNASEKRYGFFIQDEIAFDN--LIVTPGIRFDSFETKPGDTSANPSLNDASEYK 434
              F   +    R G F+QD+I   N  L +  G+R+D F   P    A  +  D +++ 
Sbjct: 388 ETPFTFADTDSNRLGLFLQDDITLLNGDLNLIGGLRYDYFRNSPDQQQAMEAGKDPADFA 447

Query: 435 KYSDSALTARLGTVYKLNQENRLFAQISQGFRAPDFQELYYSF---GNPAHGYVFKPNPN 491
             SD+  + ++G VYKL      +AQ + G++ P   + +      G      + + N +
Sbjct: 448 VMSDTFWSPKVGLVYKLTDTVSAYAQYAYGYKMPTPDQKWGELEVDGGSMTDVIIQANYD 507

Query: 492 LEAEDSVSYELGWRYNADSVSNELSIFYSDYDNFIDSQIVSGS-------FKTRDAVHQS 544
           L++E S ++ELG R N      EL+ F +   +F D Q VS          +  +  +Q 
Sbjct: 508 LKSEQSHTWELGIRGNHADTQYELTTFDTHAVDFSDWQYVSFKPPVFGPVMQPMEFKYQY 567

Query: 545 INIDKATIKGIELSNQFFWDRFMPIVGFSSRIAAAYTEGKDGNGKPLNSVSPWNAVTGIN 604
            N D+ T+ G E     +    + + G  S     YT G D NG+ LNSVSP     G+N
Sbjct: 568 FNRDQVTLYGAEAQANHWLTDSIELWGNIS-----YTHGTDENGQNLNSVSPLKGNLGVN 622

Query: 605 YDSE-----------NNWGTAVNLTYTAKKKASEI------------NGDYQPISSATVI 641
           + S+             W   ++ T        +I            N  Y     A V+
Sbjct: 623 WYSDIGGMETDIGAVVRWADKMDRTNDINLTIDDICVMGQCIPKESFNEVYNTAGYA-VL 681

Query: 642 DVTAYYKPIKDLTLRAGVFNLTDEEYYNWNDVRG---------LPSEDKDKTQAKRNFGI 692
           D+T       +L LRAGV+NL D+EY ++ DV G         +  +  D TQ  R F +
Sbjct: 682 DLTMGLHVTDNLHLRAGVYNLFDKEYVDYADVAGQSVFLLNSTMNLQKDDFTQPGRYFNL 741

Query: 693 TAKYEF 698
           +  Y+F
Sbjct: 742 SMNYQF 747