Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., putative DNA-binding transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  131 bits (329), Expect = 2e-35
 Identities = 82/285 (28%), Positives = 146/285 (51%), Gaps = 5/285 (1%)

Query: 8   EALHILDAIERRGSFAAAANELNRAPSSLSYQIQKLEQDLDLMIFDRSGHRANFTEAGKL 67
           ++L ++D + + GSF AAA +L++ PS++SY I+++E +L +++F+R     + T AG+ 
Sbjct: 5   QSLELVDIVAQVGSFTAAAAKLHKVPSAVSYAIKQIEDELGVVLFNRHHRSVSLTVAGEH 64

Query: 68  ILERGRAILAATEKLVNDATLLANGWELDITIALDGIVPAANLFPMV-EALGNISKTRVR 126
            +   RA+L+  ++L      +ANGW+  ++IALD IV A  +  ++ +   +     + 
Sbjct: 65  FVREARAMLSQMDELKRGTQRIANGWQPTLSIALDNIVRADKISVLIADFYRHFQDVELI 124

Query: 127 IQDEILAGCWEALATGRADLLICPRIEALPQD--VKAETIGTMKMIWVAAPTHYVHRRSG 184
           I+ E+  G WEALATGR+ + I     A+P     +   +G +   ++ +  H +     
Sbjct: 125 IRIEVFNGVWEALATGRSHIAI-GATTAIPVGGVFQYRDMGVIDWAFLVSKNHPLASIEA 183

Query: 185 EFNEEAREKYRAIAIADTAREQPAMSVNILQRQPRLTVSNLDAKCKALVAGLGIGTLPLQ 244
             +++    + +I + DT+RE P  +  +L  Q RL V +          GLGIG +P  
Sbjct: 184 PLSDDMLRPFPSICLEDTSREIPKRTTWLLDNQRRLVVPDWIRAINCFTNGLGIGYMPRH 243

Query: 245 VAQPYIDKGEL-KAIHGSEDLEMDIVLAWRRNQMGEAKSWCIQYL 288
           +A P+I  G L +             LAW  +    A SW + YL
Sbjct: 244 LAAPFIQAGLLMEKTLEQPKAPSPCCLAWNGDAPSPALSWVLDYL 288